CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68414	Soybean	plastid	84.93	83.82
Solyc01g100950.2.1	Tomato	cytosol	24.83	65.5
VIT_14s0060g00640.t01	Wine grape	plastid	68.21	65.19
GSMUA_Achr11P...	Banana	cytosol	60.76	62.63
CDY32178	Canola	plastid	60.1	61.63
CDY31093	Canola	plastid	61.09	59.23
AT1G09420.2	Thale cress	plastid	62.25	59.21
Os03t0318500-01	Rice	plastid	59.11	56.76
OQU92694	Sorghum	plastid	58.11	55.28
TraesCS4B01G178700.1	Wheat	plastid	56.46	55.27
TraesCS4D01G180300.2	Wheat	plastid	56.62	54.98
TraesCS4A01G126200.2	Wheat	plastid	56.46	54.82
PGSC0003DMT400007105	Potato	plastid	53.81	54.53
HORVU4Hr1G052350.8	Barley	cytosol, nucleus	57.28	53.07
Bra030775.1-P	Field mustard	plastid	59.77	52.39
KRH44236	Soybean	peroxisome	17.88	51.67
KRH47181	Soybean	nucleus, plastid	45.7	46.94
Zm00001d015288_P001	Maize	plastid	15.56	46.77
KRH44244	Soybean	nucleus, plastid	44.87	46.09
KRH01562	Soybean	endoplasmic reticulum, nucleus, plastid	43.87	44.09
KRH70548	Soybean	nucleus, plastid	43.87	44.02
Zm00001d047587_P005	Maize	nucleus	57.78	38.18
KRH07037	Soybean	endoplasmic reticulum	28.31	33.01
KRG94401	Soybean	cytosol, endoplasmic reticulum, mitochondrion	28.15	32.82
KRG94338	Soybean	cytosol, nucleus	27.98	32.56

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	EntrezGene:100796541	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1
EMBL:ACUP02012162	InterPro:G6P_DH	InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	EnsemblPlantsGene:GLYMA_19G226700	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004345	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006
GO:GO:0006098	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0050661	GO:GO:0055114	UniProt:I1NBP5	EnsemblPlants:KRG96694	ProteinID:KRG96694	ProteinID:KRG96694.1
HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781	PRINTS:PR00079	PANTHER:PTHR23429
PANTHER:PTHR23429:SF4	MetaCyc:PWY-7268	SUPFAM:SSF51735	SUPFAM:SSF55347	TIGRFAMs:TIGR00871	UniParc:UPI000233E603

Description

hypothetical protein

Coordinates

chr19:+:47838038..47843707

Molecular Weight (calculated)

68077.7 Da

IEP (calculated)

6.830

GRAVY (calculated)

-0.203

Length

604 amino acids

Sequence
(BLAST)

001: MSVSFSSTSF AFQRPAHLCS NSLTVASNNF DSVPGGLGRL VLNVRSTSLC RRFRGLKLWV LERLNFQFQP PKQPKNRNHH FKNNLENEKG SVSDSSSILH
101: VPDDKVTPME SPSLLQTGLS GAPMDVSRKP SLCIAVIGAT GELAKRKIFP ALFALYYSGF LPENVGIFGY SRKDITDEDL QSIIASTLTC RVDHQENCDD
201: KLNAFLSRTY YINGGYDNKY GMSMLNARME QIEGGSKTNR IFYLSVPQEA LLDVASCLAS SAQTQKGWNR IIFEKPFGFD ALSSHRLTQY LLSNFQEKQI
301: YRIDHLLGRN LIENLTVLRF SNLVFEPLWS RTYIDNVQVI LSEDLAVHPG RYFSGYGIIR DIVHSHVLQT IALLAMEPPI SLDGEDIRNE KLKVLRSIRK
401: LEPKDVILGQ YKTSGGAKVD ACLNGLTPTY FAAALYIDNA RWDGVPFLIK TGLGLIKHQM EIRIQFRNVP GNVYHECIGH NMDRAVNELI LRDVPDEAIL
501: VRVNNKVPGL GLQLDSSELN LLYKDKYNME VPDSYEHLLL DVIDGDSHLF MRSDELAAAW NILTPILNEI DKDNMSVELY EMGGRGPVGA YYLWAKHGVR
601: WVED

Best Arabidopsis Sequence Match ( AT1G09420.1 )
(BLAST)

001: MSLSSCLLPF SQSATAPSSS VCSCHLAASF SNFPVSSRDY SFSRSGSLVL NGGGSNLCRR FCGLKLWILK SLNRRQGNNR KHQPVNELTT HSKHTFLSDD
101: ERGFAEETRA EDLRPEENIL GTDLNDGFHN VGDLPPVSKQ LSDDLSDVRR RASLCIAVVG ATGELARGKI FPALFALYYS GYLPEDVAIF GVSRKNLTDE
201: DLRSIIASTL TCRVDHQENC GGKMDAFQSR TYYINGGYNN RDGMSRLAER MKQIEGESEA NRIFYLSVPQ EALVDVACTI GDNAQAPRGW TRIIVEKPFG
301: FNSHSSHQLT KSLLSKFEEK QIYRIDHMLG RNLIENLTVL RFSNLVFEPL WNRTYIRNIQ VIISESIAQT EKFSDGYGII RDIVHSHILQ TIALLAMEPP
401: ISLDGEDIRN EKVKVLRSIR KIDPRDVILG QYKSSSRDKN GVILNGVDPT YCAAALYIDN ARWDGVPFLV RVGTGLIKHR VEIHVQFRHV PGNLYRENIG
501: INIDLGTNEL ILRDEPDEAI LVKINNKVPG LGLQLDASEL NLLYKDRYKT EVPDSYEHLI HDVIDGDNHL FMRSDEVAAA WNILSPVLEE IDKHHTAPEL
601: YEFGGRGPVA AYYLWAKHGV PWADD

Arabidopsis Description

G6PD4Glucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4I0Y8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.