Factsheet for VIT_14s0060g00640.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96694	Soybean	plastid	65.19	68.21
Solyc01g100950.2.1	Tomato	cytosol	24.68	68.12
KRH68414	Soybean	plastid	64.08	66.18
GSMUA_Achr11P...	Banana	cytosol	61.08	65.87
CDY32178	Canola	plastid	59.18	63.5
CDY31093	Canola	plastid	61.71	62.6
AT1G09420.2	Thale cress	plastid	62.03	61.73
Os03t0318500-01	Rice	plastid	59.18	59.46
TraesCS4B01G178700.1	Wheat	plastid	57.59	59.0
TraesCS4D01G180300.2	Wheat	plastid	57.75	58.68
TraesCS4A01G126200.2	Wheat	plastid	57.59	58.52
OQU92694	Sorghum	plastid	58.7	58.43
PGSC0003DMT400007105	Potato	plastid	54.91	58.22
HORVU4Hr1G052350.8	Barley	cytosol, nucleus	57.12	55.37
Bra030775.1-P	Field mustard	plastid	59.34	54.43
VIT_12s0057g00940.t01	Wine grape	plastid	44.94	48.63
Zm00001d015288_P001	Maize	plastid	15.03	47.26
VIT_12s0057g01030.t01	Wine grape	plastid	43.67	47.18
VIT_01s0146g00060.t01	Wine grape	plastid	41.46	44.79
Zm00001d047587_P005	Maize	nucleus	57.59	39.82
VIT_14s0171g00490.t01	Wine grape	cytosol	29.11	35.66

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	EntrezGene:100254628	wikigene:100254628	Gene3D:3.30.360.10	Gene3D:3.40.50.720
MapMan:3.9.1.1	ProteinID:CBI39643	ProteinID:CBI39643.3	UniProt:D7UA79	EMBL:FN596746	InterPro:G6P_DH
InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004345
GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0006098	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0050661	GO:GO:0055114	EntrezGene:LOC100254628
wikigene:LOC100254628	HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781	PRINTS:PR00079
PANTHER:PTHR23429	PANTHER:PTHR23429:SF4	SUPFAM:SSF51735	SUPFAM:SSF55347	TIGRFAMs:TIGR00871	UniParc:UPI0001BE4D09
ArrayExpress:VIT_14s0060g00640	EnsemblPlantsGene:VIT_14s0060g00640	EnsemblPlants:VIT_14s0060g00640.t01	RefSeq:XP_002276987	RefSeq:XP_002276987.2	SEG:seg

Description

Glucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:D7UA79]

Coordinates

chr14:+:574517..580175

Molecular Weight (calculated)

70564.3 Da

IEP (calculated)

6.883

GRAVY (calculated)

-0.178

Length

632 amino acids

Sequence
(BLAST)

001: MSVSYSSFSA PFSESSVGKP FPACPNSRTL SVPSAAISRY PVARNNFPAV ADGRLVLHGS AGNFCRRICG LKLCILESLN LRHQNRRCRP TSEFNSFKNQ
101: HKDQSADHFG TNSSNEGQAS GGTSAIDLSN EVATSMESPS SLLQAHSSKF SVQSDGAPSL CIAVIGATGE LARKKIFPAL FALYYSGFLP ENVGIFGYSR
201: KDLTDEGLRS IIAATLTCRV DHQSNCGDKM HAFLNRTYYL NGGYDNKVGM AKLNAWMEMI EGESVANRIF YLSVPHEALL DVSSSLADHA QTRKGWNRII
301: IEKPFGFDAL SSHQLTRSLL SKFEEKQIYR IDHLLGRNII ENLTVLRFSN LVFEPLWSRK YIRNVQIILS EDLGMQIGRY FDGYGIIRDI VHSHILQTIA
401: LLAMEPPISL DGEDIRNEKV KVLRSIRKLE LSNVILGQFK ASSEDHVDVY LNNLTPTFFA AALYIDNARW DGVPFLIKAG MGLIQHRVEI RIQFHNVPGN
501: VYRERIGHNI DLATNELILR DAPDEAILVK VNNKIPGLGL QLDASELNLL YKDKYNVEVP DSYEHLLLDV IDGDNHLFMR SDELAAAWNI LTPILHEMDK
601: NNIAPELYEL GGRGPVGAYY LCAKHGVRWA DE

Best Arabidopsis Sequence Match ( AT1G09420.1 )
(BLAST)

001: MSLSSCLLPF SQSATAPSSS VCSCHLAASF SNFPVSSRDY SFSRSGSLVL NGGGSNLCRR FCGLKLWILK SLNRRQGNNR KHQPVNELTT HSKHTFLSDD
101: ERGFAEETRA EDLRPEENIL GTDLNDGFHN VGDLPPVSKQ LSDDLSDVRR RASLCIAVVG ATGELARGKI FPALFALYYS GYLPEDVAIF GVSRKNLTDE
201: DLRSIIASTL TCRVDHQENC GGKMDAFQSR TYYINGGYNN RDGMSRLAER MKQIEGESEA NRIFYLSVPQ EALVDVACTI GDNAQAPRGW TRIIVEKPFG
301: FNSHSSHQLT KSLLSKFEEK QIYRIDHMLG RNLIENLTVL RFSNLVFEPL WNRTYIRNIQ VIISESIAQT EKFSDGYGII RDIVHSHILQ TIALLAMEPP
401: ISLDGEDIRN EKVKVLRSIR KIDPRDVILG QYKSSSRDKN GVILNGVDPT YCAAALYIDN ARWDGVPFLV RVGTGLIKHR VEIHVQFRHV PGNLYRENIG
501: INIDLGTNEL ILRDEPDEAI LVKINNKVPG LGLQLDASEL NLLYKDRYKT EVPDSYEHLI HDVIDGDNHL FMRSDEVAAA WNILSPVLEE IDKHHTAPEL
601: YEFGGRGPVA AYYLWAKHGV PWADD

Arabidopsis Description

G6PD4Glucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4I0Y8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.