CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66499	Canola	plastid	91.68	91.97
HORVU1Hr1G055380.1	Barley	cytosol	26.05	90.94
CDX88248	Canola	cytosol	7.35	89.47
CDX80599	Canola	cytosol	7.35	88.31
KRH55202	Soybean	cytosol	21.95	87.88
AT5G26860.1	Thale cress	cytosol, plastid	88.22	82.84
CDY68112	Canola	cytosol	7.35	81.93
CDY22820	Canola	cytosol	7.35	81.93
Bra020562.1-P	Field mustard	cytosol	96.22	81.13
CDY25200	Canola	cytosol	7.24	80.72
CDX80598	Canola	plastid	62.49	79.72
CDX88247	Canola	plastid	61.95	79.58
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	76.32	72.19
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	75.03	70.74
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	75.03	70.74
HORVU2Hr1G016000.1	Barley	plastid	75.03	70.74
TraesCS2A01G095500.1	Wheat	plastid	74.92	70.64
EER97776	Sorghum	plastid	74.59	69.7
CDY18802	Canola	cytosol	37.19	69.49
CDY18823	Canola	plastid	67.89	68.86
CDX87027	Canola	mitochondrion	12.32	68.26
Os07t0689300-01	Rice	mitochondrion	34.38	67.37
CDX99569	Canola	plastid	17.51	66.39
CDY22818	Canola	plastid	58.49	63.95
KXG39532	Sorghum	mitochondrion	70.16	63.38
CDY25198	Canola	cytosol, mitochondrion	29.41	61.96
CDY22821	Canola	mitochondrion	60.0	56.75
CDY22819	Canola	mitochondrion	41.41	56.49
CDY33341	Canola	plastid	12.22	55.94
CDY25199	Canola	mitochondrion	42.81	48.77
CDY66234	Canola	plastid	10.16	47.96
CDY18803	Canola	cytosol	7.14	46.15
Os03t0306400-01	Rice	plasma membrane	3.57	45.21
CDY25202	Canola	cytosol	47.24	38.81
CDY33510	Canola	mitochondrion, peroxisome	30.92	32.24
CDX77732	Canola	mitochondrion, peroxisome	30.92	32.24
CDX80228	Canola	endoplasmic reticulum, extracellular, mitochondrion, nucleus	4.76	18.41

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	MapMan:19.4.2.4	Gene3D:2.30.130.40	Gene3D:3.30.230.10	Gene3D:3.40.50.300
GO:A0A078EWG1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	EnsemblPlants:CDY05546	ProteinID:CDY05546	ProteinID:CDY05546.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252
GO:GO:0005488	GO:GO:0005524	GO:GO:0006508	GO:GO:0006515	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	EnsemblPlantsGene:GSBRNA2T00120490001
InterPro:IPR003111	InterPro:IPR008269	InterPro:IPR014721	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ	InterPro:Lon_proteolytic
InterPro:Lon_substr-bd	InterPro:Lonm_euk	HAMAP:MF_03120	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02190
PFAM:PF05362	PIRSF:PIRSF001174	PRINTS:PR00830	ScanProsite:PS01046	PFscan:PS51786	PFscan:PS51787
PANTHER:PTHR43718	PANTHER:PTHR43718:SF2	InterPro:PUA-like_sf	InterPro:Peptidase_S16_AS	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr
SMART:SM00382	SMART:SM00464	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF88697	TIGRFAMs:TIGR00763
UniParc:UPI0004EF0790	SEG:seg	:	:	:	:

Description

BnaA02g31450D

Coordinates

chrLK031962:+:783750..789812

Molecular Weight (calculated)

102452.0 Da

IEP (calculated)

5.976

GRAVY (calculated)

-0.309

Length

925 amino acids

Sequence
(BLAST)

001: MLKLFSSSTA SRAHHHLSPA IRPGASSVES PFFKALSHLT GLNRRSTSLG GRRAAESDSD GSDAKSSSAI VPTNPRPEDC LTVLALPVAH RPLFPGFYMP
101: IYVKDPKVLA ALQESRRRQA PYAGAFLLKD DPSTDSSSSA DVEKNINELK GKDLLKRLHE VGTLAQISSI QGDQVILVGH RRLRITEMVS EEPLTVKVDH
201: LKDKPFDMDD DVIKATSFEV ISTLRDVLKT SSLWRDHVQT YTQHIGEFTY PRLADFGAAI CGANRHQAQE VLEELDVHKR LRLTLELMKK EREISKIQET
301: IAKAIEEKIS GEQRRYLLNE QLKAIKKELG VETDDKSALS EKFKERIDPN KEKIPAHVLQ VIEEELTKLQ LLEASSSEFN VTRNYLDWLT ILPWGNYSDE
401: NFDVVRAQQI LDEDHYGLSD VKERILEFIA VGRLRGTSQG KIICLSGPPG VGKTSIGRSI ARALNRKFFR FSVGGLADVA EIKGHRRTYV GAMPGKMVQC
501: LKSVGTANPL VLIDEIDKLG RGHAGDPASA LLELLDPEQN ANFLDHYLDV TIDLSKVLFV CTANVIDMIP NPLLDRMEVI SIAGYITDEK VHIARDYLEK
601: TARGDCGIKP EQVEVSDAAL LSLIENYCRE AGVRNLQKQI EKIYRKIALK LVREGVVPEE PAVAVDAEEA EIVTKLDVES TENHVVEESP APAAKEPKEE
701: AQNEKKAVEK VMIDESNLAD YVGKPVFHAE KIYEPTPVGV VMGLAWTSMG GSTLYIETTV VEEGEGKGCL NVTGQLGDVM KESAQIAHTV ARKIMLEKEP
801: ENQFFANSKL HLHVPAGATP KDGPSAGCTM ITSLLSLAMK KPVQKDLAMT GEVTLTGRIL PIGGVKEKTI AARRSQVKTI IFPEANRRDF DELAENVKEG
901: LDVHFVDDYK KIFDLAFVSD NKQQD

Best Arabidopsis Sequence Match ( AT5G26860.1 )
(BLAST)

001: MKGFDTNLRL QASSPEFSNG FLPKRQNFIK LNRRNCYPRS SFSPTMLKLF TSSASRVHHL TPVSRVVGSS PVESPLFKAL SQITGWNRRS TSLGHRAFFC
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED

Arabidopsis Description

LON_ARA_ARAlon protease 1 [Source:TAIR;Acc:AT5G26860]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.