Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:
  • plastid 2
  • peroxisome 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, peroxisome
Any Predictor:mitochondrion, peroxisome, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:peroxisome
PProwler:peroxisome
TargetP:mitochondrion
WoLF PSORT:peroxisome
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G47040.1 Thale cress mitochondrion, peroxisome 97.97 97.86
CDY33510 Canola mitochondrion, peroxisome 97.75 97.75
VIT_02s0012g00310.t01 Wine grape cytosol, mitochondrion, peroxisome, plastid 85.01 84.91
PGSC0003DMT400004645 Potato cytosol, mitochondrion, peroxisome, plastid 81.74 82.67
Solyc08g077440.2.1 Tomato plastid 81.74 82.67
KRH04278 Soybean cytosol, mitochondrion, peroxisome, plastid 82.07 82.17
KRH57559 Soybean cytosol, mitochondrion, peroxisome, plastid 81.51 81.69
KRH77266 Soybean mitochondrion 81.62 81.44
EER99247 Sorghum plastid 80.05 80.23
GSMUA_Achr1P07700_001 Banana cytosol, mitochondrion, peroxisome, plastid 79.48 79.3
TraesCS5B01G322000.2 Wheat cytosol 78.35 78.44
TraesCS5D01G328300.2 Wheat plastid 78.24 78.33
TraesCS5A01G321500.1 Wheat cytosol 78.13 78.22
GSMUA_Achr2P03430_001 Banana mitochondrion 77.23 77.23
Os09t0533400-01 Rice mitochondrion 25.82 76.85
HORVU5Hr1G081930.2 Barley cytosol, plastid 77.9 76.44
Zm00001d021301_P002 Maize peroxisome 79.59 73.01
Zm00001d006214_P002 Maize plasma membrane 64.94 56.92
CDY25200 Canola cytosol 3.72 39.76
CDY68112 Canola cytosol 3.72 39.76
CDY22820 Canola cytosol 3.72 39.76
CDY25198 Canola cytosol, mitochondrion 18.71 37.81
CDX88248 Canola cytosol 3.16 36.84
CDX80599 Canola cytosol 3.16 36.36
CDY18802 Canola cytosol 19.84 35.56
CDX87027 Canola mitochondrion 6.54 34.73
CDY66499 Canola plastid 32.24 31.02
CDY18823 Canola plastid 31.79 30.92
CDY05546 Canola plastid 32.24 30.92
CDY18803 Canola cytosol 4.74 29.37
CDY22818 Canola plastid 27.73 29.08
CDX88247 Canola plastid 23.45 28.89
CDX80598 Canola plastid 23.45 28.69
CDY22819 Canola mitochondrion 20.86 27.29
CDY22821 Canola mitochondrion 29.54 26.79
CDY25199 Canola mitochondrion 22.32 24.38
CDY25202 Canola cytosol 28.75 22.65
CDX99569 Canola plastid 4.51 16.39
CDX80228 Canola endoplasmic reticulum, extracellular, mitochondrion, nucleus 4.17 15.48
CDY33341 Canola plastid 2.71 11.88
CDY66234 Canola plastid 2.37 10.71
Protein Annotations
Gene3D:1.10.8.60Gene3D:1.20.58.1480MapMan:19.4.2.4Gene3D:3.30.230.10Gene3D:3.40.50.300GO:A0A078CLV4
InterPro:AAA+_ATPaseInterPro:ATPase_AAA_coreEnsemblPlants:CDX77732ProteinID:CDX77732ProteinID:CDX77732.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004176GO:GO:0004252GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005777
GO:GO:0005782GO:GO:0006508GO:GO:0006515GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0030163EnsemblPlantsGene:GSBRNA2T00128744001InterPro:IPR003111
InterPro:IPR008269InterPro:IPR014721InterPro:Lon_PrtaseInterPro:Lon_bac/euk-typInterPro:Lon_proteolyticInterPro:Lon_substr-bd
InterPro:Lonp2_eukHAMAP:MF_03121InterPro:P-loop_NTPasePFAM:PF00004PFAM:PF02190PFAM:PF05362
PIRSF:PIRSF001174PRINTS:PR00830ScanProsite:PS01046PFscan:PS51786PFscan:PS51787PANTHER:PTHR10046
PANTHER:PTHR10046:SF24InterPro:PUA-like_sfInterPro:Peptidase_S16_ASInterPro:Ribosomal_S5_D2-typ_foldInterPro:Ribosomal_S5_D2-typ_fold_subgrSMART:SM00382
SMART:SM00464SUPFAM:SSF52540SUPFAM:SSF54211SUPFAM:SSF88697TIGRFAMs:TIGR00763UniParc:UPI0004EC4AB9
SEG:seg:::::
Description
BnaC07g19860D
Coordinates
chrLK031812:-:1399535..1404998
Molecular Weight (calculated)
97726.3 Da
IEP (calculated)
7.001
GRAVY (calculated)
-0.241
Length
887 amino acids
Sequence
(BLAST)
001: MADTVELPSR LAILPFRNKV LLPGAIIRIR CTSHSSVTLV EQELWQKEEK GLIGILPVRD DAEGSSIGTM INPGGGSDSG ERSLKFLVGT TDAQKSDAKD
101: QQEVHWHSRG VAARALHLSR GVEKPSGRVT YVVVLEGLSR FNVQELGKRG PYSVARITSL EMTKGELEQV EHDPDFVALS RQFKTTAMEL VSVLEQKQKT
201: GGRTKVLLET VPIHKLADIF VASFEMSFEE QLSMLDSVDL KVRLSKATEL VDRHLQSIRV AEKITQKVEG QLSKSQKEYL LRQQMRAIKE ELGDNDDDED
301: DVAALERKMQ AAGMPSNIWK HAQRELRRLK KMQPQQPGYN SSRVYLELLA DLPWEKASEE HELDLKAAKE RLDSDHYGLA KVKQRIIEYL AVRKLKPDAR
401: GPVLCFVGPP GVGKTSLASS IAAALGRKFV RLSLGGVKDE ADIRGHRRTY IGSMPGRLID GLKRVGVCNP VMLLDEIDKT GSDVRGDPAS ALLEVLDPEQ
501: NKSFNDHYLN VPYDLSKVVF VATANRVQPI PPPLLDRMEL IELPGYTQEE KLKIAMRHLI PRVLDQHGLS PEFLKIPEAM VKNIIQRYTR EAGVRSLERN
601: LAAVARAAAV MVAEHEQTLP LSKDVQKLAS PLLNGRMAEG GEVEMEVIPM GENDHEIGST FQSPSALVVD ETMLEKILGP PRFDDSEAAD RVASAGVSVG
701: LVWTTFGGEV QFVEATSMVG KGELHLTGQL GDVIKESAQL ALTWVRARAS DFKLALAGDM NVLDGRDIHI HFPAGAVPKD GPSAGVTLVT ALVSLFSQKR
801: VRADTAMTGE MTLRGLVLPV GGIKDKILAA HRYGIKRVIL PQRNSKDLVE VPAAVLSSLE VILAKRMEDV LENAFEGGCP WRNHSKL
Best Arabidopsis Sequence Match ( AT5G47040.1 )
(BLAST)
001: MAETVELPSR LAILPFRNKV LLPGAIIRIR CTSHSSVTLV EQELWQKEEK GLIGILPVRD DAEGSSIGTM INPGAGSDSG ERSLKFLVGT TDAQKSDAKD
101: QQDLQWHTRG VAARALHLSR GVEKPSGRVT YVVVLEGLSR FNVQELGKRG PYSVARITSL EMTKAELEQV KQDPDFVALS RQFKTTAMEL VSVLEQKQKT
201: GGRTKVLLET VPIHKLADIF VASFEMSFEE QLSMLDSVDL KVRLSKATEL VDRHLQSIRV AEKITQKVEG QLSKSQKEYL LRQQMRAIKE ELGDNDDDED
301: DVAALERKMQ AAGMPSNIWK HAQRELRRLK KMQPQQPGYN SSRVYLELLA DLPWDKASEE HELDLKAAKE RLDSDHYGLA KVKQRIIEYL AVRKLKPDAR
401: GPVLCFVGPP GVGKTSLASS IAAALGRKFV RLSLGGVKDE ADIRGHRRTY IGSMPGRLID GLKRVGVCNP VMLLDEIDKT GSDVRGDPAS ALLEVLDPEQ
501: NKSFNDHYLN VPYDLSKVVF VATANRVQPI PPPLLDRMEL IELPGYTQEE KLKIAMRHLI PRVLDQHGLS SEFLKIPEAM VKNIIQRYTR EAGVRSLERN
601: LAALARAAAV MVAEHEQSLP LSKDVQKLTS PLLNGRMAEG GEVEMEVIPM GVNDHEIGGT FQSPSALVVD ETMLEKILGP PRFDDSEAAD RVASAGVSVG
701: LVWTTFGGEV QFVEATSMVG KGEMHLTGQL GDVIKESAQL ALTWVRARAS DFKLALAGDM NVLDGRDIHI HFPAGAVPKD GPSAGVTLVT ALVSLFSQKR
801: VRADTAMTGE MTLRGLVLPV GGIKDKILAA HRYGIKRVIL PQRNSKDLVE VPAAVLSSLE VILAKRMEDV LENAFEGGCP WRNNYSKL
Arabidopsis Description
LON2Lon protease homolog 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O64948]
SUBAcon: [mitochondrion,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.