CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018886.1-P	Field mustard	plastid	98.7	98.7
CDY22820	Canola	cytosol	8.98	91.57
CDY68112	Canola	cytosol	8.98	91.57
CDY25200	Canola	cytosol	8.87	90.36
CDX88248	Canola	cytosol	7.09	78.95
CDX80599	Canola	cytosol	7.09	77.92
CDY25198	Canola	cytosol, mitochondrion	35.58	68.56
CDY18802	Canola	cytosol	38.65	66.06
CDY22819	Canola	mitochondrion	52.13	65.04
CDY22821	Canola	mitochondrion	73.4	63.5
AT3G05790.1	Thale cress	plastid	68.44	61.47
CDY18823	Canola	plastid	64.3	59.65
CDY05546	Canola	plastid	63.95	58.49
CDY66499	Canola	plastid	63.59	58.35
Os07t0689300-01	Rice	mitochondrion	32.39	58.05
CDX87027	Canola	mitochondrion	10.99	55.69
KRH55202	Soybean	cytosol	15.13	55.41
HORVU1Hr1G055380.1	Barley	cytosol	17.14	54.72
CDY25199	Canola	mitochondrion	51.65	53.82
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	61.47	53.17
HORVU2Hr1G016000.1	Barley	plastid	60.17	51.89
TraesCS2A01G095500.1	Wheat	plastid	59.93	51.68
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	59.93	51.68
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	59.81	51.58
CDX80598	Canola	plastid	43.74	51.03
CDX88247	Canola	plastid	43.38	50.97
EER97776	Sorghum	plastid	59.57	50.91
KXG39532	Sorghum	mitochondrion	57.33	47.36
CDY18803	Canola	cytosol	7.68	45.45
Os03t0306400-01	Rice	plasma membrane	3.9	45.21
CDY25202	Canola	cytosol	58.98	44.32
CDY33341	Canola	plastid	7.21	30.2
CDY33510	Canola	mitochondrion, peroxisome	29.43	28.07
CDX77732	Canola	mitochondrion, peroxisome	29.08	27.73
CDX99569	Canola	plastid	7.8	27.05
CDY66234	Canola	plastid	6.26	27.04
CDX80228	Canola	endoplasmic reticulum, extracellular, mitochondrion, nucleus	4.26	15.06

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	MapMan:19.4.2.4	Gene3D:2.30.130.40	Gene3D:3.30.230.10	Gene3D:3.40.50.300
GO:A0A078GDU5	UniProt:A0A078GDU5	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	EnsemblPlants:CDY22818	ProteinID:CDY22818
ProteinID:CDY22818.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252
GO:GO:0005488	GO:GO:0005524	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008236	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	EnsemblPlantsGene:GSBRNA2T00021164001
InterPro:IPR003111	InterPro:IPR008269	InterPro:IPR014721	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ	InterPro:Lon_proteolytic
InterPro:Lon_substr-bd	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02190	PFAM:PF05362	PIRSF:PIRSF001174
PRINTS:PR00830	ScanProsite:PS01046	PFscan:PS51786	PFscan:PS51787	PANTHER:PTHR43718	PANTHER:PTHR43718:SF2
InterPro:PUA-like_sf	InterPro:Peptidase_S16_AS	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00382	SMART:SM00464
SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF88697	TIGRFAMs:TIGR00763	UniParc:UPI0004EE0E81	SEG:seg

Description

BnaA06g02590DLon protease homolog [Source:UniProtKB/TrEMBL;Acc:A0A078GDU5]

Coordinates

chrLK032136:+:323385..327856

Molecular Weight (calculated)

94481.5 Da

IEP (calculated)

7.626

GRAVY (calculated)

-0.218

Length

846 amino acids

Sequence
(BLAST)

001: MLKPYTSHHM PLAIRVGSTP ANRSLLLLKA WRQQTRWNRS SHDLARRAFF STLTYSKPTV SCSAIVSSKP CLDDCLTVIA VPFPDGPLIP GFYMPLCVKD
101: PKVLAALQES ISGETPYAGA FLLKDDKDPS TGSSVIHQVG TLAQILSIQG EQVIVIGRER LQITEMVCKD PLTVKTHHLK DKPYDKDDEV IRSTYFEDNI
201: GNSNYRKLAE FLLQKRRRKL TDSGAGIFEA VDFNYQKLAD FGAGISDAKK HKIQEVLEEL DVHKRLNLTL ELVKKQVEMN KIQLFHASLF PVTHATATFK
301: KRIEPIKEKI PKHVLKVIEE QFAKIDRIIR NYGSTDDIFT YVDWLTALPW GKCSDDNFDV LRAEKILDED HYGLRDVKER ILEFIAVGTL TGNPQGRIIC
401: LSGPPGVGKT SIARSVARAL DRKFFRLAVG GLSDSSHIKG DRGVYIGAMP GKMVQCLKEV GTENPLVLLD EIDKLGKKRS RDPEGALLEL LDPQQNSHFL
501: DYFLDVTIDL SKVLFVCTAN VTDMIPGPLL DRMEVITLAG YTTDEKMHIA RDYLVKIVSG KCGIKPEQVD VSDTALLSLI ENYCREAGVR NLQKQIEKIF
601: RKIALKLVRQ RAPAKTDLES SAEGSMEHST AVAEKFMINE SNLADYVGKP VFRGEKIYEQ TPVGVVMGLA WTSMGGSTLY IETTFVEEGE GKGGLHITGH
701: LGSVMKESAE IAHTVARRIM FDKDPKNLFF ANSKLHLHVP EGATPKDGPS AGCTMITSLL SLAMKKPVRK NLAMTGEVTL TGRILPIGGL KEKTMAARRS
801: QVKEIIFPEA NRIDFEHLEE SFKEGLDVHF VDEYEQIFEL AFGYEQ

Best Arabidopsis Sequence Match ( AT3G05780.1 )
(BLAST)

001: MMPKRFNTSG FDTTLRLPSY YGFLHLTQSL TLNSRVFYGA RHVTPPAIRI GSNPVQSLLL FRAPTQLTGW NRSSRDLLGR RVSFSDRSDG VDLLSSSPIL
101: STNPNLDDSL TVIALPLPHK PLIPGFYMPI HVKDPKVLAA LQESTRQQSP YVGAFLLKDC ASTDSSSRSE TEDNVVEKFK VKGKPKKKRR KELLNRIHQV
201: GTLAQISSIQ GEQVILVGRR RLIIEEMVSE DPLTVRVDHL KDKPYDKDNA VIKASYVEVI STLREVLKTN SLWRDQDIGD FSYQHLADFG AGISGANKHK
301: NQGVLTELDV HKRLELTLEL VKKQVEINKI KETDDGSSLS AKIRVRIDTK RDKIPKHVIK VMEEEFTKLE MLEENYSDFD LTYNYLHWLT VLPWGNFSYE
401: NFDVLRAKKI LDEDHYGLSD VKERILEFIA VGRLRGTSQG KIICLSGPPG VGKTSIGRSI ARALDRKFFR FSVGGLSDVA EIKGHCQTYV GAMPGKMVQC
501: LKSVGTANPL ILFDEIDKLG RCHTGDPASA LLEVMDPEQN AKFLDHFLNV TIDLSKVLFV CTANVIEMIP GPLLDRMEVI DLSGYVTDEK MHIARDYLVK
601: KTCRDCGIKP EHVDLSDAAL LSLIENYCRE AGVRNLQKQI EKIYRKVALE LVRQGAVSFD VTDTKDTKSL AKTDSEVKRM KVADIMKILE SATGDSTESK
701: TKQSGLVAKT FEKVMIDESN LADYVGKPVF QEEKIYEQTP VGVVMGLAWT SMGGSTLYIE TTFVEEGLGK GGLHITGQLG DVMKESAQIA HTVARRIMFE
801: KEPENLFFAN SKLHLHVPEG ATPKDGPSAG CTMITSFLSL AMKKLVRKDL AMTGEVTLTG RILPIGGVKE KTIAARRSQI KTIIFPEANR RDFEELAENM
901: KEGLDVHFVD EYEKIFDLAF NYDH

Arabidopsis Description

LON3Lon protease homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M9L8]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.