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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 2
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d028875_P001 Maize cytosol 64.84 91.33
KRH55202 Soybean cytosol 19.53 86.58
CDX88248 Canola cytosol 5.76 77.63
CDX80599 Canola cytosol 5.76 76.62
Solyc10g024320.1.1 Tomato cytosol 43.65 75.63
EER97776 Sorghum plastid 71.39 73.84
CDY22820 Canola cytosol 5.86 72.29
CDY68112 Canola cytosol 5.86 72.29
CDY25200 Canola cytosol 5.76 71.08
CDY66499 Canola plastid 63.48 70.5
CDY05546 Canola plastid 63.38 70.16
Bra009924.1-P Field mustard mitochondrion, plastid 62.89 69.47
KRH33822 Soybean mitochondrion 65.14 69.41
VIT_14s0060g01230.t01 Wine grape mitochondrion, plastid 66.11 69.22
Bra040521.1-P Field mustard cytosol 35.64 68.61
KRG90539 Soybean mitochondrion 65.33 68.06
Solyc10g024310.1.1 Tomato mitochondrion, vacuole 7.62 66.67
GSMUA_Achr1P16010_001 Banana cytosol 5.47 65.88
CDX88247 Canola plastid 46.09 65.56
CDX80598 Canola plastid 46.29 65.38
AT5G26860.1 Thale cress cytosol, plastid 62.7 65.18
AT3G05790.1 Thale cress plastid 58.59 63.69
GSMUA_Achr7P05610_001 Banana mitochondrion 65.23 63.26
CDY18802 Canola cytosol 30.47 63.03
Bra040254.1-P Field mustard plastid 54.0 61.79
CDY18823 Canola plastid 54.69 61.4
AT3G05780.1 Thale cress mitochondrion, plastid 53.52 59.31
Bra020562.1-P Field mustard cytosol 63.48 59.25
Bra018886.1-P Field mustard plastid 47.56 57.56
CDY22818 Canola plastid 47.36 57.33
CDY25198 Canola cytosol, mitochondrion 24.41 56.95
CDX87027 Canola mitochondrion 9.28 56.89
AT3G05775.1 Thale cress cytosol, mitochondrion, peroxisome, plastid 7.42 56.72
Bra018887.1-P Field mustard mitochondrion 37.5 54.7
Bra018889.1-P Field mustard mitochondrion 49.71 52.8
CDY22819 Canola mitochondrion 34.67 52.36
CDY22821 Canola mitochondrion 50.0 52.35
CDX99569 Canola plastid 11.82 49.59
Solyc10g024300.1.1 Tomato cytosol 11.13 49.14
CDY25199 Canola mitochondrion 36.13 45.57
CDY18803 Canola cytosol 5.96 42.66
Bra040522.1-P Field mustard cytoskeleton, cytosol, peroxisome 11.62 41.75
CDY33341 Canola plastid 7.81 39.6
CDY25202 Canola cytosol 41.11 37.39
CDY66234 Canola plastid 7.03 36.73
EER99247 Sorghum plastid 28.61 33.11
CDX80228 Canola endoplasmic reticulum, extracellular, mitochondrion, nucleus 3.81 16.32
Protein Annotations
Gene3D:1.10.8.60Gene3D:1.20.58.1480MapMan:19.4.2.4Gene3D:3.30.230.10Gene3D:3.40.50.300UniProt:A0A1B6QNN4
InterPro:AAA+_ATPaseInterPro:ATPase_AAA_coreGO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003824GO:GO:0004176GO:GO:0004252GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005759GO:GO:0006139
GO:GO:0006259GO:GO:0006508GO:GO:0006515GO:GO:0006950GO:GO:0008150GO:GO:0008152
GO:GO:0008233GO:GO:0008236GO:GO:0009056GO:GO:0009058GO:GO:0009987GO:GO:0016043
GO:GO:0016787GO:GO:0016887GO:GO:0019538GO:GO:0030163GO:GO:0034599GO:GO:0043565
GO:GO:0051131GO:GO:0070407GO:GO:0090296InterPro:IPR003111InterPro:IPR008269InterPro:IPR014721
EnsemblPlants:KXG39532ProteinID:KXG39532ProteinID:KXG39532.1InterPro:Lon_PrtaseInterPro:Lon_bac/euk-typInterPro:Lon_proteolytic
InterPro:Lon_substr-bdInterPro:Lonm_eukHAMAP:MF_03120InterPro:P-loop_NTPasePFAM:PF00004PFAM:PF02190
PFAM:PF05362PRINTS:PR00830ScanProsite:PS01046PFscan:PS51786PFscan:PS51787PANTHER:PTHR43718
PANTHER:PTHR43718:SF2InterPro:PUA-like_sfInterPro:Peptidase_S16_ASInterPro:Ribosomal_S5_D2-typ_foldInterPro:Ribosomal_S5_D2-typ_fold_subgrSMART:SM00382
SMART:SM00464EnsemblPlantsGene:SORBI_3001G396500SUPFAM:SSF52540SUPFAM:SSF54211SUPFAM:SSF88697TIGRFAMs:TIGR00763
UniParc:UPI00081AD4B0SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:+:68206008..68218797
Molecular Weight (calculated)
112413.0 Da
IEP (calculated)
5.849
GRAVY (calculated)
-0.222
Length
1024 amino acids
Sequence
(BLAST)
0001: MLRAAAVAGL PARLAAKRPL APVTVAARVA LASTEARSPL LRALRRGGVP VRGRRVCICS AAGDDDSGSE AASSAAEGEE AGSGEEGEGE NASAIVPAVL
0101: RPEDCHTVIA LPLLQRPLFP GFYMPVYVKD PKLLQALVEN SKRSIPYAGA FLVKDEEETG PYAVISSESD TFFLNATGSE SGNSIHELKG KELLKNLHDV
0201: GTLAQITRIQ GNLVVLLGHH RIRTSEIVVD EPLTVKVDHL KELPYDKDDD VIKAMSFEVI STLRDVLRVN SLWKNQVQAY TQHMGDFNYP RLADFGAAIS
0301: GANKLLCQEV LEELDVCKRL KLTLELIKRE LEISRLQESI AKTIEEKITG EQRRYLLNEL LKAIKKELGL ETDDKTALSE KFRERIEAKK DKCPPHVLQV
0401: IEEELTKLQL LEASSSEFSV TRNYLDWLTV LPWGDYSDEN FDVHHAQHIL DEDHYGLADV KERILEFIAV GKLRGSSQGK IICLSGPPGV GKTSIGRSIA
0501: RALNRKFYRF SVGGLTDVAE IKGHRRTYVG AMPGKIVQCL KSVGTSNPLV LIDEIDKLGK GHSGDPASAL LELLDPEQNA NFLDHYLDVP VDLSKVLFVC
0601: TANVIEMIPS PLLDRMEIIA IAGYITDEKM HIARDYLEKN TREACGIKPE QVEVTNDALL ALIENYCREA GVRNLQKQIE KIYRKIALKL VRQGVSNEPP
0701: RDITVVEEDK KSFNFDVATK VEDKNLKNSI AEDASVDVGP IDSSLDNIDV VPLTTESKVG HNEHLNEAPA KTFAEETAKL SNTFKIPEAN NESTHRTMEV
0801: LVDKPEEKVV VNASNLGNFV GKPVFQAERI YNQTPVGVVM GLAWNAMGGS TLYIETAKVE ESKGKVTLVV TGQLGDVMKE SAQIAHTVCR AVLLEKEPNN
0901: PFFAKSKLHL HVPAGATPKD GPSAGCTMVT SMLSLAMGKS VKKDLAMTGE VTLTGRILPI GGVKEKTIAA RRSGVKTIIF PSANRRDFDE LASNVKEGLE
1001: VHFVDKYSEI YDIAFANDTK TQES
Best Arabidopsis Sequence Match ( AT5G26860.1 )
(BLAST)
001: MKGFDTNLRL QASSPEFSNG FLPKRQNFIK LNRRNCYPRS SFSPTMLKLF TSSASRVHHL TPVSRVVGSS PVESPLFKAL SQITGWNRRS TSLGHRAFFC
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED
Arabidopsis Description
LON_ARA_ARAlon protease 1 [Source:TAIR;Acc:AT5G26860]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.