CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33341	Canola	plastid	72.96	70.79
CDX99569	Canola	plastid	73.47	59.02
Solyc10g024300.1.1	Tomato	cytosol	38.27	32.33
CDX88247	Canola	plastid	50.51	13.75
CDX80598	Canola	plastid	50.0	13.52
CDY66499	Canola	plastid	51.02	10.85
CDY05546	Canola	plastid	47.96	10.16
CDY22819	Canola	mitochondrion	30.61	8.85
TraesCS2A01G095500.1	Wheat	plastid	41.33	8.26
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	40.82	8.15
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	40.82	8.15
HORVU2Hr1G016000.1	Barley	plastid	40.82	8.15
CDY25199	Canola	mitochondrion	33.67	8.13
EER97776	Sorghum	plastid	40.31	7.98
CDY18823	Canola	plastid	36.22	7.79
KXG39532	Sorghum	mitochondrion	36.73	7.03
CDY22821	Canola	mitochondrion	34.18	6.85
CDY22818	Canola	plastid	27.04	6.26
CDY33510	Canola	mitochondrion, peroxisome	10.71	2.37
CDX77732	Canola	mitochondrion, peroxisome	10.71	2.37
CDY25202	Canola	cytosol	8.16	1.42
CDY18803	Canola	cytosol	1.02	1.4
CDX80228	Canola	endoplasmic reticulum, extracellular, mitochondrion, nucleus	1.53	1.26
CDY68112	Canola	cytosol	0.0	0.0
CDY25200	Canola	cytosol	0.0	0.0
HORVU1Hr1G055380.1	Barley	cytosol	0.0	0.0
CDY25198	Canola	cytosol, mitochondrion	0.0	0.0
CDY22820	Canola	cytosol	0.0	0.0
Os03t0306400-01	Rice	plasma membrane	0.0	0.0
Os07t0689300-01	Rice	mitochondrion	0.0	0.0
CDY18802	Canola	cytosol	0.0	0.0
CDX88248	Canola	cytosol	0.0	0.0
CDX87027	Canola	mitochondrion	0.0	0.0
CDX80599	Canola	cytosol	0.0	0.0
Zm00001d043949_P001	Maize	cytosol, plastid	0.0	0.0

Protein Annotations

MapMan:35.1	GO:A0A078JHS7	UniProt:A0A078JHS7	EnsemblPlants:CDY66234	ProteinID:CDY66234	ProteinID:CDY66234.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488
GO:GO:0005524	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787
GO:GO:0019538	GO:GO:0030163	EnsemblPlantsGene:GSBRNA2T00052346001	InterPro:IPR003111	InterPro:Lon_Prtase	InterPro:Lon_substr-bd
PFAM:PF02190	PANTHER:PTHR43718	PANTHER:PTHR43718:SF2	InterPro:PUA-like_sf	SMART:SM00464	SUPFAM:SSF88697
UniParc:UPI0004EF46A4	SEG:seg	:	:	:	:

Description

BnaCnng50070DBnaCnng50070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHS7]

Coordinates

chrLK035156:+:1542..2697

Molecular Weight (calculated)

22307.7 Da

IEP (calculated)

7.017

GRAVY (calculated)

-0.378

Length

196 amino acids

Sequence
(BLAST)

001: MNLSELMVSP LTCLVFHLKR MIETHHNRRL SRSSRRLVCW FSSSPTYDDS ISPHGVSSSG GRCLQFGDQL LDLSKHMLLR QLDSNEESSL SSSADMEKNI
101: NDLKGKDLLK RLHEVGTLAQ ISSIQGDQVI LVGHRRLRIT EMVSEEPLTV KVDHLKDKPF DMDDDVIKAT SFEVISTLRD VLKTSSLWRD HVQTYT

Best Arabidopsis Sequence Match ( AT5G26860.1 )
(BLAST)

001: MKGFDTNLRL QASSPEFSNG FLPKRQNFIK LNRRNCYPRS SFSPTMLKLF TSSASRVHHL TPVSRVVGSS PVESPLFKAL SQITGWNRRS TSLGHRAFFC
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED

Arabidopsis Description

LON_ARA_ARAlon protease 1 [Source:TAIR;Acc:AT5G26860]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.