CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88248	Canola	cytosol	97.4	98.68
CDY68112	Canola	cytosol	81.82	75.9
CDY22820	Canola	cytosol	81.82	75.9
CDY25200	Canola	cytosol	80.52	74.7
CDY18803	Canola	cytosol	64.94	34.97
CDY25198	Canola	cytosol, mitochondrion	79.22	13.9
CDY18802	Canola	cytosol	80.52	12.53
Os07t0689300-01	Rice	mitochondrion	75.32	12.29
CDY66499	Canola	plastid	88.31	7.38
CDY05546	Canola	plastid	88.31	7.35
AT3G05780.1	Thale cress	mitochondrion, plastid	85.71	7.14
CDY22818	Canola	plastid	77.92	7.09
CDY18823	Canola	plastid	83.12	7.02
CDY22821	Canola	mitochondrion	80.52	6.34
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	77.92	6.13
EER97776	Sorghum	plastid	75.32	5.86
KXG39532	Sorghum	mitochondrion	76.62	5.76
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	72.73	5.71
HORVU2Hr1G016000.1	Barley	plastid	72.73	5.71
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	71.43	5.61
TraesCS2A01G095500.1	Wheat	plastid	71.43	5.61
CDY25202	Canola	cytosol	80.52	5.51
CDX77732	Canola	mitochondrion, peroxisome	36.36	3.16
CDY33510	Canola	mitochondrion, peroxisome	36.36	3.16
Os03t0306400-01	Rice	plasma membrane	2.6	2.74
CDX80228	Canola	endoplasmic reticulum, extracellular, mitochondrion, nucleus	6.49	2.09
CDY25199	Canola	mitochondrion	16.88	1.6
CDY22819	Canola	mitochondrion	11.69	1.33
CDX80598	Canola	plastid	3.9	0.41
CDX88247	Canola	plastid	2.6	0.28
CDX87027	Canola	mitochondrion	0.0	0.0
CDY66234	Canola	plastid	0.0	0.0
HORVU1Hr1G055380.1	Barley	cytosol	0.0	0.0
KRH55202	Soybean	cytosol	0.0	0.0
CDY33341	Canola	plastid	0.0	0.0
CDX99569	Canola	plastid	0.0	0.0

Protein Annotations

Gene3D:3.30.230.10	MapMan:35.1	GO:A0A078CX70	EnsemblPlants:CDX80599	ProteinID:CDX80599	ProteinID:CDX80599.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488
GO:GO:0005524	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787
GO:GO:0019538	GO:GO:0030163	EnsemblPlantsGene:GSBRNA2T00133727001	InterPro:IPR008269	InterPro:IPR014721	InterPro:Lon_Prtase
InterPro:Lon_proteolytic	PFAM:PF05362	PRINTS:PR00830	PFscan:PS51786	PANTHER:PTHR43718	InterPro:Ribosomal_S5_D2-typ_fold
InterPro:Ribosomal_S5_D2-typ_fold_subgr	SUPFAM:SSF54211	UniParc:UPI0004EDEFA8	:	:	:

Description

BnaC07g28450D

Coordinates

chrLK031821:+:1585425..1585831

Molecular Weight (calculated)

8731.3 Da

IEP (calculated)

4.629

GRAVY (calculated)

-0.466

Length

77 amino acids

Sequence
(BLAST)

1: MTGEVTLTGR ILPIGGVKEK TIAARRSQVK TIIFPEANRR DFEELAENVK EGLDVHFVDD YGKIFELAFG YDDKQQD

Best Arabidopsis Sequence Match ( AT5G26860.1 )
(BLAST)

001: MKGFDTNLRL QASSPEFSNG FLPKRQNFIK LNRRNCYPRS SFSPTMLKLF TSSASRVHHL TPVSRVVGSS PVESPLFKAL SQITGWNRRS TSLGHRAFFC
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED

Arabidopsis Description

LON_ARA_ARAlon protease 1 [Source:TAIR;Acc:AT5G26860]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.