Factsheet for VIT_14s0060g01230.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 4
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55202	Soybean	cytosol	21.78	92.21
HORVU1Hr1G055380.1	Barley	cytosol	24.85	91.7
Zm00001d043949_P001	Maize	cytosol, plastid	7.77	80.0
CDX88248	Canola	cytosol	6.13	78.95
CDX80599	Canola	cytosol	6.13	77.92
KRH33822	Soybean	mitochondrion	76.48	77.84
Solyc10g024310.1.1	Tomato	mitochondrion, vacuole	9.3	77.78
CDY66499	Canola	plastid	72.6	77.01
Solyc10g024320.1.1	Tomato	cytosol	46.42	76.82
KRG90539	Soybean	mitochondrion	77.1	76.7
CDY05546	Canola	plastid	72.19	76.32
Bra009924.1-P	Field mustard	mitochondrion, plastid	72.19	76.16
CDX88247	Canola	plastid	54.19	73.61
CDX80598	Canola	plastid	54.5	73.52
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	73.42	73.19
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	73.31	73.09
TraesCS2A01G095500.1	Wheat	plastid	73.21	72.99
HORVU2Hr1G016000.1	Barley	plastid	73.21	72.99
CDY68112	Canola	cytosol	6.13	72.29
CDY22820	Canola	cytosol	6.13	72.29
EER97776	Sorghum	plastid	72.8	71.92
AT5G26860.1	Thale cress	cytosol, plastid	72.39	71.88
CDY25200	Canola	cytosol	6.03	71.08
Bra040521.1-P	Field mustard	cytosol	37.73	69.36
AT3G05790.1	Thale cress	plastid	66.56	69.11
Os07t0689300-01	Rice	mitochondrion	32.41	67.16
GSMUA_Achr1P16010_001	Banana	cytosol	5.83	67.06
KXG39532	Sorghum	mitochondrion	69.22	66.11
Bra040254.1-P	Field mustard	plastid	60.33	65.92
CDY18823	Canola	plastid	61.35	65.79
Bra020562.1-P	Field mustard	cytosol	72.6	64.72
AT3G05780.1	Thale cress	mitochondrion, plastid	60.43	63.96
CDY18802	Canola	cytosol	32.11	63.43
Bra018886.1-P	Field mustard	plastid	53.27	61.58
CDY22818	Canola	plastid	53.17	61.47
CDY25198	Canola	cytosol, mitochondrion	26.69	59.45
Bra018887.1-P	Field mustard	mitochondrion	41.72	58.12
CDX87027	Canola	mitochondrion	9.92	58.08
Bra018889.1-P	Field mustard	mitochondrion	55.73	56.54
CDY22821	Canola	mitochondrion	55.42	55.42
CDY22819	Canola	mitochondrion	38.24	55.16
Os03t0306400-01	Rice	plasma membrane	3.78	50.68
CDY25199	Canola	mitochondrion	40.18	48.4
CDY18803	Canola	cytosol	6.54	44.76
Bra040522.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	12.47	42.81
CDY25202	Canola	cytosol	43.97	38.19
VIT_02s0012g00310.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	31.39	34.57

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	EntrezGene:100254508	wikigene:100254508	MapMan:19.4.2.4	Gene3D:2.30.130.40
Gene3D:3.30.230.10	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	ProteinID:CCB61911	ProteinID:CCB61911.1
ncoils:Coil	UniProt:F6I4S4	EMBL:FN596746	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0006139	GO:GO:0006259	GO:GO:0006508	GO:GO:0006515	GO:GO:0006950	GO:GO:0007005
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016887	GO:GO:0019538	GO:GO:0030163
GO:GO:0034599	GO:GO:0043565	GO:GO:0051131	GO:GO:0070407	GO:GO:0090296	InterPro:IPR003111
InterPro:IPR008269	InterPro:IPR014721	EntrezGene:LOC100254508	wikigene:LOC100254508	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ
InterPro:Lon_proteolytic	InterPro:Lon_substr-bd	InterPro:Lonm_euk	HAMAP:MF_03120	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF02190	PFAM:PF05362	PRINTS:PR00830	ScanProsite:PS01046	PFscan:PS51786	PFscan:PS51787
PANTHER:PTHR43718	PANTHER:PTHR43718:SF2	InterPro:PUA-like_sf	InterPro:Peptidase_S16_AS	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr
SMART:SM00382	SMART:SM00464	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF88697	TIGR:TC65718
TIGRFAMs:TIGR00763	UniParc:UPI0001984904	ArrayExpress:VIT_14s0060g01230	EnsemblPlantsGene:VIT_14s0060g01230	EnsemblPlants:VIT_14s0060g01230.t01	unigene:Vvi.23273
RefSeq:XP_002277956	RefSeq:XP_002277956.1	SEG:seg	:	:	:

Description

Lon protease homolog, mitochondrial [Source:UniProtKB/TrEMBL;Acc:F6I4S4]

Coordinates

chr14:+:968983..981647

Molecular Weight (calculated)

107607.0 Da

IEP (calculated)

5.408

GRAVY (calculated)

-0.300

Length

978 amino acids

Sequence
(BLAST)

001: MLKVISCSGL QGRFRNITPS LRQGTQSSTP LLRVLSQLRG VNRWSPNSCG RAFFCSDSSD VSDPVVGAEG KAAEAAADEA ESKASSAIVP TSPRPEDCLT
101: VLALPLPHRP LFPGFYMPIY VKDPKLLAAL VESRKRQAPY AGAFLLKDEP GTEPSLSSGS ETEKNIYDLK GKELFNRLHD VGTLAQITSI QGDQVVLIGH
201: RRLRVTEMVS EEPLTVKVDH LKDKPYDKDD DVIKATSFEV ISTLRDVLKT SSLWRDHVQT YTQHIGDFNF PRLADFGAAI SGANKLQCQQ VLEELDVHKR
301: LQLTLELVKK ELEISKIQES IAKAIEEKIS GEQRRYLLNE QLKAIKKELG LETDDKTALS AKFRERLEPK KEKCPPHVLQ VIEEELTKLQ LLEASSSEFN
401: VTRNYLDWLT ALPWGNYSDE NFDVMQAQQI LDEDHYGLTD VKERILEFIA VGKLRGSSQG KIICLSGPPG VGKTSIGRSI ARALNRKFFR FSVGGLADVA
501: EIKGHRRTYI GAMPGKMVQC LKNVGTANPL VLIDEIDKLG KGHAGDPASA LLELLDPEQN ANFLDHYLDV PIDLSKVLFV CTANIVEMIP NPLLDRMEVI
601: SVAGYITDEK MHIARDYLEK NTREACGIKP EQAELTDAAL LDLIENYCRE AGVRNLQKQI EKIFRKIALR LVRQEALNEP PAAEVKAEGV QELKETLVVG
701: ETQSEAESVE DSNHELATET STATDAVQEG EGAADSKVTV ETETEKIQEI ESPKTAEKVL VESSNLSDFV GKPVFHADRI YDQTPVGVVM GLAWTAMGGS
801: TLYIETTQIE QGEGKGALHV TGQLGDVMKE SAQIAHTVAR AILAEKEPDS PFFANSKLHL HVPAGATPKD GPSAGCTMTT SLLSLATNKH VKKDLAMTGE
901: VTLTGKILPI GGVKEKTIAA RRSGVKTIVF PSANRRDFDE LAANVKEGLD VHFVDNYNEI FNLAFGHHQQ TQQETILA

Best Arabidopsis Sequence Match ( AT5G26860.1 )
(BLAST)

001: MKGFDTNLRL QASSPEFSNG FLPKRQNFIK LNRRNCYPRS SFSPTMLKLF TSSASRVHHL TPVSRVVGSS PVESPLFKAL SQITGWNRRS TSLGHRAFFC
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED

Arabidopsis Description

LON_ARA_ARAlon protease 1 [Source:TAIR;Acc:AT5G26860]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.