Factsheet for GSMUA_Achr1P16010_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043949_P001	Maize	cytosol, plastid	31.76	28.42
Bra040522.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	43.53	12.98
Os07t0689300-01	Rice	mitochondrion	68.24	12.29
Bra040521.1-P	Field mustard	cytosol	63.53	10.15
Solyc10g024320.1.1	Tomato	cytosol	68.24	9.81
Os03t0306400-01	Rice	plasma membrane	5.88	6.85
Bra018886.1-P	Field mustard	plastid	63.53	6.38
Bra040254.1-P	Field mustard	plastid	67.06	6.37
Bra009924.1-P	Field mustard	mitochondrion, plastid	69.41	6.36
KRG90539	Soybean	mitochondrion	70.59	6.1
KRH33822	Soybean	mitochondrion	68.24	6.04
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	67.06	5.83
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	67.06	5.81
EER97776	Sorghum	plastid	67.06	5.76
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	65.88	5.71
TraesCS2A01G095500.1	Wheat	plastid	65.88	5.71
Bra018889.1-P	Field mustard	mitochondrion	64.71	5.71
HORVU2Hr1G016000.1	Barley	plastid	64.71	5.61
GSMUA_Achr7P05610_001	Banana	mitochondrion	69.41	5.59
KXG39532	Sorghum	mitochondrion	65.88	5.47
Bra020562.1-P	Field mustard	cytosol	69.41	5.38
GSMUA_Achr1P07700_001	Banana	cytosol, mitochondrion, peroxisome, plastid	37.65	3.6
GSMUA_Achr2P03430_001	Banana	mitochondrion	36.47	3.49
KRH55202	Soybean	cytosol	2.35	0.87
Bra018887.1-P	Field mustard	mitochondrion	5.88	0.71
CDX80228	Canola	endoplasmic reticulum, extracellular, mitochondrion, nucleus	0.0	0.0
Solyc10g024310.1.1	Tomato	mitochondrion, vacuole	0.0	0.0
HORVU1Hr1G055380.1	Barley	cytosol	0.0	0.0
AT3G05775.1	Thale cress	cytosol, mitochondrion, peroxisome, plastid	0.0	0.0

Protein Annotations

Gene3D:3.30.230.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004176
GO:GO:0004252	GO:GO:0005488	GO:GO:0005524	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	EnsemblPlantsGene:GSMUA_Achr1G16010_001	EnsemblPlants:GSMUA_Achr1P16010_001
EnsemblPlants:GSMUA_Achr1T16010_001	InterPro:IPR008269	InterPro:IPR014721	InterPro:Lon_Prtase	InterPro:Lon_proteolytic	UniProt:M0S0A9
PFAM:PF05362	PANTHER:PTHR43718	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SUPFAM:SSF54211	UniParc:UPI00029634A4

Description

Lon protease homolog, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr1G16010_001]

Coordinates

chr1:+:12007403..12007660

Molecular Weight (calculated)

9292.6 Da

IEP (calculated)

11.283

GRAVY (calculated)

-0.212

Length

85 amino acids

Sequence
(BLAST)

1: MKENAQKDHT VARAILLQKE PGNKLFANSK LHLHVPAGAA QKGGPPTRIT LLLSLAMNKP VKKELSMISE VTVTGRMLPI RGVWN

Best Arabidopsis Sequence Match ( AT5G26860.1 )
(BLAST)

001: MKGFDTNLRL QASSPEFSNG FLPKRQNFIK LNRRNCYPRS SFSPTMLKLF TSSASRVHHL TPVSRVVGSS PVESPLFKAL SQITGWNRRS TSLGHRAFFC
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED

Arabidopsis Description

LON_ARA_ARAlon protease 1 [Source:TAIR;Acc:AT5G26860]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.