Factsheet for Bra040522.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, cytoskeleton, peroxisome

Predictor Summary:

cytosol 3
mitochondrion 2
cytoskeleton 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18803	Canola	cytosol	48.77	97.2
Zm00001d043949_P001	Maize	cytosol, plastid	18.95	56.84
GSMUA_Achr1P16010_001	Banana	cytosol	12.98	43.53
Os07t0689300-01	Rice	mitochondrion	38.95	23.52
Bra040521.1-P	Field mustard	cytosol	43.51	23.31
Bra018886.1-P	Field mustard	plastid	44.56	15.01
Bra040254.1-P	Field mustard	plastid	45.96	14.64
Bra009924.1-P	Field mustard	mitochondrion, plastid	45.96	14.13
AT3G05790.1	Thale cress	plastid	44.91	13.59
Bra018889.1-P	Field mustard	mitochondrion	45.26	13.38
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	42.81	12.47
Bra020562.1-P	Field mustard	cytosol	46.32	12.03
HORVU2Hr1G016000.1	Barley	plastid	41.4	12.03
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	41.4	12.03
TraesCS2A01G095500.1	Wheat	plastid	41.05	11.93
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	41.05	11.93
EER97776	Sorghum	plastid	40.7	11.72
KXG39532	Sorghum	mitochondrion	41.75	11.62
Bra024968.1-P	Field mustard	mitochondrion	25.61	8.23
Bra018887.1-P	Field mustard	mitochondrion	18.95	7.69
Os03t0306400-01	Rice	plasma membrane	1.75	6.85
HORVU1Hr1G055380.1	Barley	cytosol	2.81	3.02
KRH55202	Soybean	cytosol	1.05	1.3

Protein Annotations

MapMan:19.4.2.4	Gene3D:3.30.230.10	EnsemblPlantsGene:Bra040522	EnsemblPlants:Bra040522.1	EnsemblPlants:Bra040522.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488	GO:GO:0005524
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009056
GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR008269	InterPro:IPR014721	InterPro:Lon_Prtase
InterPro:Lon_proteolytic	UniProt:M4FHE4	PFAM:PF05362	PRINTS:PR00830	PFscan:PS51786	PANTHER:PTHR43718
InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SUPFAM:SSF54211	UniParc:UPI000253ED94	:	:

Description

AT5G26860 (E=1e-056) LON_ARA_ARA, LON1 | LON1 (LON PROTEASE 1); ATP binding / ATP-dependent peptidase/ serine-type peptidase

Coordinates

chrScaffold000215:-:5650..6753

Molecular Weight (calculated)

31714.1 Da

IEP (calculated)

4.745

GRAVY (calculated)

-0.049

Length

285 amino acids

Sequence
(BLAST)

001: MDAELESSPA VHPSLQYPLT IVIRVAGKKV YLEVPSVVFD AKPLAISDSE FLKYFKDSKV HFINAQGQID VSEADKTVMF KAINLASYVG KQVLYEQTPI
101: GFAIGLAKWY VEGQATAFID GLAWYVKTML VEESEEDICS INVIGQVGME TYESACIAYE AAQRILLRKQ PGNTFFTNSK VYVYMPTSDG ASAGCTICTS
201: LLSLAMNKSV RKNLAMSGEI TPTGEILQIG HVKDKTMGAR RSQLKTIIYP EANRREFDEL PENLKDGLDV HFVDEYEQIF ELAFN

Best Arabidopsis Sequence Match ( AT3G05780.1 )
(BLAST)

001: MMPKRFNTSG FDTTLRLPSY YGFLHLTQSL TLNSRVFYGA RHVTPPAIRI GSNPVQSLLL FRAPTQLTGW NRSSRDLLGR RVSFSDRSDG VDLLSSSPIL
101: STNPNLDDSL TVIALPLPHK PLIPGFYMPI HVKDPKVLAA LQESTRQQSP YVGAFLLKDC ASTDSSSRSE TEDNVVEKFK VKGKPKKKRR KELLNRIHQV
201: GTLAQISSIQ GEQVILVGRR RLIIEEMVSE DPLTVRVDHL KDKPYDKDNA VIKASYVEVI STLREVLKTN SLWRDQDIGD FSYQHLADFG AGISGANKHK
301: NQGVLTELDV HKRLELTLEL VKKQVEINKI KETDDGSSLS AKIRVRIDTK RDKIPKHVIK VMEEEFTKLE MLEENYSDFD LTYNYLHWLT VLPWGNFSYE
401: NFDVLRAKKI LDEDHYGLSD VKERILEFIA VGRLRGTSQG KIICLSGPPG VGKTSIGRSI ARALDRKFFR FSVGGLSDVA EIKGHCQTYV GAMPGKMVQC
501: LKSVGTANPL ILFDEIDKLG RCHTGDPASA LLEVMDPEQN AKFLDHFLNV TIDLSKVLFV CTANVIEMIP GPLLDRMEVI DLSGYVTDEK MHIARDYLVK
601: KTCRDCGIKP EHVDLSDAAL LSLIENYCRE AGVRNLQKQI EKIYRKVALE LVRQGAVSFD VTDTKDTKSL AKTDSEVKRM KVADIMKILE SATGDSTESK
701: TKQSGLVAKT FEKVMIDESN LADYVGKPVF QEEKIYEQTP VGVVMGLAWT SMGGSTLYIE TTFVEEGLGK GGLHITGQLG DVMKESAQIA HTVARRIMFE
801: KEPENLFFAN SKLHLHVPEG ATPKDGPSAG CTMITSFLSL AMKKLVRKDL AMTGEVTLTG RILPIGGVKE KTIAARRSQI KTIIFPEANR RDFEELAENM
901: KEGLDVHFVD EYEKIFDLAF NYDH

Arabidopsis Description

LON3Lon protease homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M9L8]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.