Factsheet for Bra040254.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18823	Canola	plastid	97.21	95.39
HORVU1Hr1G055380.1	Barley	cytosol	23.46	79.25
Zm00001d043949_P001	Maize	cytosol, plastid	8.16	76.84
KRH55202	Soybean	cytosol	19.78	76.62
Bra040521.1-P	Field mustard	cytosol	44.58	75.0
AT3G05790.1	Thale cress	plastid	70.95	67.41
Bra009924.1-P	Field mustard	mitochondrion, plastid	69.5	67.1
GSMUA_Achr1P16010_001	Banana	cytosol	6.37	67.06
Bra018886.1-P	Field mustard	plastid	59.78	63.24
Os07t0689300-01	Rice	mitochondrion	31.84	60.38
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	65.92	60.33
HORVU2Hr1G016000.1	Barley	plastid	65.47	59.73
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	65.25	59.53
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	65.14	59.43
TraesCS2A01G095500.1	Wheat	plastid	65.03	59.33
EER97776	Sorghum	plastid	65.14	58.89
Bra020562.1-P	Field mustard	cytosol	69.94	57.06
Bra018887.1-P	Field mustard	mitochondrion	44.47	56.7
Bra018889.1-P	Field mustard	mitochondrion	60.89	56.54
KXG39532	Sorghum	mitochondrion	61.79	54.0
Bra040522.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	14.64	45.96
Os03t0306400-01	Rice	plasma membrane	3.69	45.21
Bra024968.1-P	Field mustard	mitochondrion	31.06	31.34

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	MapMan:19.4.2.4	Gene3D:3.30.230.10	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_core	EnsemblPlantsGene:Bra040254	EnsemblPlants:Bra040254.1	EnsemblPlants:Bra040254.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005759	GO:GO:0006139	GO:GO:0006259	GO:GO:0006508	GO:GO:0006515	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009056	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016887
GO:GO:0019538	GO:GO:0030163	GO:GO:0034599	GO:GO:0043565	GO:GO:0051131	GO:GO:0070407
GO:GO:0090296	InterPro:IPR003111	InterPro:IPR008269	InterPro:IPR014721	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ
InterPro:Lon_proteolytic	InterPro:Lon_substr-bd	InterPro:Lonm_euk	UniProt:M4FGM6	HAMAP:MF_03120	InterPro:P-loop_NTPase
PFAM:PF00004	PFAM:PF02190	PFAM:PF05362	PIRSF:PIRSF001174	PRINTS:PR00830	ScanProsite:PS01046
PFscan:PS51786	PFscan:PS51787	PANTHER:PTHR43718	PANTHER:PTHR43718:SF2	InterPro:PUA-like_sf	InterPro:Peptidase_S16_AS
InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00382	SMART:SM00464	SUPFAM:SSF52540	SUPFAM:SSF54211
SUPFAM:SSF88697	TIGRFAMs:TIGR00763	UniParc:UPI0002544E9A	SEG:seg	:	:

Description

AT3G05790 (E=0.0) LON4 | LON4 (LON PROTEASE 4); ATP binding / ATP-dependent peptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase/ serine-type peptidase

Coordinates

chrA01:+:28334183..28339057

Molecular Weight (calculated)

99095.1 Da

IEP (calculated)

6.451

GRAVY (calculated)

-0.288

Length

895 amino acids

Sequence
(BLAST)

001: MLKLLSSTAH TIHHSNPSPR VGSNPIKTPL FKALSQLTGW NRSSQELSRR AFCSNQSDAA ADPKSDASNP EASDTKSSSA VVVSTTTTSL DDYQTVIALP
101: LPKKPLFPGF YMPIYVKDRK LIEALQESMR RQTPYAGAFL LKDDEASADS SSSSTTCETE NVLEKFKGKE LLNRMHEVGT LAQISSIQGE QVILIGRRRL
201: RITDMVSEDP LSVKVEHIKH IGDFNYQHLA DFGAGISGAN KHENQGVLEE LDVHKRLELT LDLLKKEVEV NKIQASIAKT VEEKFSGERR QIVLKEQLKA
301: IKKELGVETD GKSAFSEKFK ERIEVNKDKI PKHVLKVIEE NLTKLQLLEP TSSEFDVTLN YLDWLTVLPW GNISDENFDV LRAEKILNED HYGLSDVKER
401: ILEFIAVGSL RGTSQGKIIC LSGPPGVGKT SIGRSIARAL DRKFFRFSVG GLSDVAEING HRRTYIGAMP GKLVQCLKTV GTENPIILID EIDKLGKGHS
501: GDPASALLEV MDPEQNANFR DHYLDVTIDL SKVLFVCTAN VIDTIPKPLL DRMEVISLAG YITDEKLHIA RDFLVKNTCR DCGIKPEQVG VSDAALLSLI
601: ENYCREAGVR SLHKNIEKIY RKIALKLVRQ RASTVVPAVS VDVTDTEDTK PLAKTDSETS TEGSTVLTDE SATKTEQSGV VAEKVMIEES NLADYLGKPV
701: FHTDKIYEKT PVGVVMGLAW TSMGGSTLYI ETTFVEEVER KGRLRITGQL GSVMKESAQI AHTVARRIML EKEPDNLFLA NSKLHLHVPE GATPKDGPSA
801: GCTMITSLLS LAMKKPVRKD LAMTGEVTLT GRILPIGGVK EKTIAARRCQ VKMIIFPEAN RKDFDELPEN VKEGLDVHFV DEYEQIFELA FGYDH

Best Arabidopsis Sequence Match ( AT3G05790.2 )
(BLAST)

001: MLKFLTPTAY ASHHVTPATR FRSTPVKNLL FKQLTLLTGW NRSSYELGRR SFSSDLDSDT KSSTTTVSAK PHLDDCLTVI ALPLPHKPLI PGFYMPIYVK
101: DPKVLAALQE SRRQQAPYAG AFLLKDDASS DSSSSSETEN ILEKLKGKEL INRIHEVGTL AQISSIQGEQ VILIGHRQLR ITEMVSESED PLTVKVDHLK
201: DKPYDKDDDV IKATYFQVMS TLRDVLKTTS LWRDHVRTYT QHIGEFNYPK LADFGAGISG ANKHQNQGVL EELDVHKRLE LTLELVKKEV EINKIQESIA
301: KAVEEKFSGD RRRIILKEQI NAIKKELGGE TDSKSALSEK FRGRIDPIKD KIPGHVLKVI EEELKKLQLL ETSSSEFDVT CNYLDWLTVL PWGNFSDENF
401: NVLRAEKILD EDHYGLSDVK ERILEFIAVG GLRGTSQGKI ICLSGPTGVG KTSIGRSIAR ALDRKFFRFS VGGLSDVAEI KGHRRTYIGA MPGKMVQCLK
501: NVGTENPLVL IDEIDKLGVR GHHGDPASAM LELLDPEQNA NFLDHYLDVP IDLSKVLFVC TANVTDTIPG PLLDRMEVIT LSGYITDEKM HIARDYLEKT
601: ARRDCGIKPE QVDVSDAAFL SLIEHYCREA GVRNLQKQIE KIFRKIALKL VRKAASTEVP RISDDVTTDT EETKSLAKTD LESPETSAEG STVLTDELAT
701: GDPTESTTEQ SGEVAETVEK YMIDESNLSD YVGKPVFQEE KIYEQTPVGV VMGLAWTSMG GSTLYIETTF VEEGEGKGGL HITGRLGDVM KESAEIAHTV
801: ARRIMLEKEP ENKLFANSKL HLHVPAGATP KDGPSAGCTM ITSLLSLALK KPVRKDLAMT GEVTLTGRIL AIGGVKEKTI AARRSQVKVI IFPEANRRDF
901: DELARNVKEG LEVHFVDEYE QIFELAFGYD H

Arabidopsis Description

LON4Lon protease homolog 4, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M9L7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.