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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • cytosol 1
  • extracellular 3
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
EpiLoc:mitochondrion
MultiLoc:cytosol
Plant-mPloc:extracellular, mitochondrion
PProwler:secretory
YLoc:extracellular
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH55202 Soybean cytosol 32.88 10.39
CDY25198 Canola cytosol, mitochondrion 39.73 6.61
GSMUA_Achr1P16010_001 Banana cytosol 6.85 5.88
Solyc10g024320.1.1 Tomato cytosol 46.58 5.75
CDY18802 Canola cytosol 35.62 5.25
Bra040521.1-P Field mustard cytosol 36.99 5.08
CDX80598 Canola plastid 39.73 4.0
CDY22818 Canola plastid 45.21 3.9
Bra018886.1-P Field mustard plastid 45.21 3.9
CDX88247 Canola plastid 38.36 3.89
KRH33822 Soybean mitochondrion 50.68 3.85
CDY22819 Canola mitochondrion 35.62 3.83
VIT_14s0060g01230.t01 Wine grape mitochondrion, plastid 50.68 3.78
AT3G05790.1 Thale cress plastid 47.95 3.72
Bra018887.1-P Field mustard mitochondrion 35.62 3.7
Bra040254.1-P Field mustard plastid 45.21 3.69
KRG90539 Soybean mitochondrion 49.32 3.66
CDY18823 Canola plastid 45.21 3.62
CDY68112 Canola cytosol 4.11 3.61
CDY25200 Canola cytosol 4.11 3.61
CDY22820 Canola cytosol 4.11 3.61
CDY66499 Canola plastid 45.21 3.58
CDY25199 Canola mitochondrion 39.73 3.57
AT3G05780.1 Thale cress mitochondrion, plastid 45.21 3.57
CDY05546 Canola plastid 45.21 3.57
Bra009924.1-P Field mustard mitochondrion, plastid 45.21 3.56
AT5G26860.1 Thale cress cytosol, plastid 45.21 3.35
Bra018889.1-P Field mustard mitochondrion 43.84 3.32
GSMUA_Achr7P05610_001 Banana mitochondrion 47.95 3.31
CDY22821 Canola mitochondrion 43.84 3.27
Bra020562.1-P Field mustard cytosol 45.21 3.01
CDY25202 Canola cytosol 41.1 2.66
CDX88248 Canola cytosol 2.74 2.63
CDX80599 Canola cytosol 2.74 2.6
Os07t0689300-01 Rice mitochondrion 16.44 2.54
CDX80228 Canola endoplasmic reticulum, extracellular, mitochondrion, nucleus 8.22 2.51
CDX87027 Canola mitochondrion 5.48 2.4
Os09t0533400-01 Rice mitochondrion 8.22 2.01
Bra040522.1-P Field mustard cytoskeleton, cytosol, peroxisome 6.85 1.75
AT3G05775.1 Thale cress cytosol, mitochondrion, peroxisome, plastid 2.74 1.49
CDY18803 Canola cytosol 2.74 1.4
CDY66234 Canola plastid 0.0 0.0
CDX99569 Canola plastid 0.0 0.0
Solyc10g024300.1.1 Tomato cytosol 0.0 0.0
Solyc10g024310.1.1 Tomato mitochondrion, vacuole 0.0 0.0
CDY33341 Canola plastid 0.0 0.0
Zm00001d028501_P001 Maize cytosol 0.0 0.0
Zm00001d043893_P001 Maize cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Os03t0306400-01EnsemblPlantsGene:Os03g0306400GO:GO:0005575GO:GO:0016020GO:GO:0016021ProteinID:BAS83814.1
TMHMM:TMhelixUniParc:UPI00039399B7UniProt:A0A0P0VXA1MapMan:35.2::
Description
Lon protease 1, LON PROTEASE 1Similar to Lon protease homolog, mitochondrial. (Os03t0306400-01)
Coordinates
chr3:-:10890004..10893861
Molecular Weight (calculated)
8215.4 Da
IEP (calculated)
8.050
GRAVY (calculated)
0.889
Length
73 amino acids
Sequence
(BLAST)
1: GLTDVKERIL EFIAVGKLRG SSQGSIILSC FYFLCIFYVL FMCVWEAFSK PLTSMQLGLQ MHSMLFLSNI AVA
Best Arabidopsis Sequence Match ( AT3G05780.1 )
(BLAST)
001: MMPKRFNTSG FDTTLRLPSY YGFLHLTQSL TLNSRVFYGA RHVTPPAIRI GSNPVQSLLL FRAPTQLTGW NRSSRDLLGR RVSFSDRSDG VDLLSSSPIL
101: STNPNLDDSL TVIALPLPHK PLIPGFYMPI HVKDPKVLAA LQESTRQQSP YVGAFLLKDC ASTDSSSRSE TEDNVVEKFK VKGKPKKKRR KELLNRIHQV
201: GTLAQISSIQ GEQVILVGRR RLIIEEMVSE DPLTVRVDHL KDKPYDKDNA VIKASYVEVI STLREVLKTN SLWRDQDIGD FSYQHLADFG AGISGANKHK
301: NQGVLTELDV HKRLELTLEL VKKQVEINKI KETDDGSSLS AKIRVRIDTK RDKIPKHVIK VMEEEFTKLE MLEENYSDFD LTYNYLHWLT VLPWGNFSYE
401: NFDVLRAKKI LDEDHYGLSD VKERILEFIA VGRLRGTSQG KIICLSGPPG VGKTSIGRSI ARALDRKFFR FSVGGLSDVA EIKGHCQTYV GAMPGKMVQC
501: LKSVGTANPL ILFDEIDKLG RCHTGDPASA LLEVMDPEQN AKFLDHFLNV TIDLSKVLFV CTANVIEMIP GPLLDRMEVI DLSGYVTDEK MHIARDYLVK
601: KTCRDCGIKP EHVDLSDAAL LSLIENYCRE AGVRNLQKQI EKIYRKVALE LVRQGAVSFD VTDTKDTKSL AKTDSEVKRM KVADIMKILE SATGDSTESK
701: TKQSGLVAKT FEKVMIDESN LADYVGKPVF QEEKIYEQTP VGVVMGLAWT SMGGSTLYIE TTFVEEGLGK GGLHITGQLG DVMKESAQIA HTVARRIMFE
801: KEPENLFFAN SKLHLHVPEG ATPKDGPSAG CTMITSFLSL AMKKLVRKDL AMTGEVTLTG RILPIGGVKE KTIAARRSQI KTIIFPEANR RDFEELAENM
901: KEGLDVHFVD EYEKIFDLAF NYDH
Arabidopsis Description
LON3Lon protease homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M9L8]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.