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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY05546 Canola plastid 91.97 91.68
HORVU1Hr1G055380.1 Barley cytosol 26.14 90.94
CDX88248 Canola cytosol 7.38 89.47
CDX80599 Canola cytosol 7.38 88.31
KRH55202 Soybean cytosol 22.02 87.88
CDY68112 Canola cytosol 7.38 81.93
CDY22820 Canola cytosol 7.38 81.93
CDX80598 Canola plastid 63.88 81.24
CDX88247 Canola plastid 63.34 81.11
CDY25200 Canola cytosol 7.27 80.72
AT5G26860.1 Thale cress cytosol, plastid 85.14 79.7
Bra020562.1-P Field mustard cytosol 91.65 77.03
VIT_14s0060g01230.t01 Wine grape mitochondrion, plastid 77.01 72.6
CDY18823 Canola plastid 70.5 71.27
TraesCS2D01G094000.1 Wheat mitochondrion, plastid 74.73 70.23
TraesCS2B01G110800.1 Wheat mitochondrion, plastid 74.73 70.23
HORVU2Hr1G016000.1 Barley plastid 74.62 70.13
TraesCS2A01G095500.1 Wheat plastid 74.51 70.03
EER97776 Sorghum plastid 74.84 69.7
CDY18802 Canola cytosol 37.09 69.09
CDX87027 Canola mitochondrion 12.15 67.07
Os07t0689300-01 Rice mitochondrion 34.27 66.95
CDX99569 Canola plastid 16.92 63.93
CDY22818 Canola plastid 58.35 63.59
KXG39532 Sorghum mitochondrion 70.5 63.48
CDY25198 Canola cytosol, mitochondrion 29.39 61.73
CDY22821 Canola mitochondrion 59.87 56.44
CDY22819 Canola mitochondrion 41.21 56.05
CDY33341 Canola plastid 11.5 52.48
CDY66234 Canola plastid 10.85 51.02
CDY25199 Canola mitochondrion 42.95 48.77
CDY18803 Canola cytosol 7.16 46.15
Os03t0306400-01 Rice plasma membrane 3.58 45.21
CDY25202 Canola cytosol 47.18 38.63
CDY33510 Canola mitochondrion, peroxisome 31.02 32.24
CDX77732 Canola mitochondrion, peroxisome 31.02 32.24
CDX80228 Canola endoplasmic reticulum, extracellular, mitochondrion, nucleus 4.77 18.41
Protein Annotations
Gene3D:1.10.8.60Gene3D:1.20.58.1480MapMan:19.4.2.4Gene3D:2.30.130.40Gene3D:3.30.230.10Gene3D:3.40.50.300
GO:A0A078JIF3UniProt:A0A078JIF3InterPro:AAA+_ATPaseInterPro:ATPase_AAA_coreEnsemblPlants:CDY66499ProteinID:CDY66499
ProteinID:CDY66499.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003824GO:GO:0004176GO:GO:0004252GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005759GO:GO:0006139
GO:GO:0006259GO:GO:0006508GO:GO:0006515GO:GO:0006950GO:GO:0008150GO:GO:0008152
GO:GO:0008233GO:GO:0008236GO:GO:0009056GO:GO:0009058GO:GO:0009987GO:GO:0016043
GO:GO:0016787GO:GO:0016887GO:GO:0019538GO:GO:0030163GO:GO:0034599GO:GO:0043565
GO:GO:0051131GO:GO:0070407GO:GO:0090296EnsemblPlantsGene:GSBRNA2T00054450001InterPro:IPR003111InterPro:IPR008269
InterPro:IPR014721InterPro:Lon_PrtaseInterPro:Lon_bac/euk-typInterPro:Lon_proteolyticInterPro:Lon_substr-bdInterPro:Lonm_euk
HAMAP:MF_03120InterPro:P-loop_NTPasePFAM:PF00004PFAM:PF02190PFAM:PF05362PIRSF:PIRSF001174
PRINTS:PR00830ScanProsite:PS01046PFscan:PS51786PFscan:PS51787PANTHER:PTHR43718PANTHER:PTHR43718:SF2
InterPro:PUA-like_sfInterPro:Peptidase_S16_ASInterPro:Ribosomal_S5_D2-typ_foldInterPro:Ribosomal_S5_D2-typ_fold_subgrSMART:SM00382SMART:SM00464
SUPFAM:SSF52540SUPFAM:SSF54211SUPFAM:SSF88697TIGRFAMs:TIGR00763UniParc:UPI0004EDF87ASEG:seg
Description
BnaC02g48360DLon protease homolog, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A078JIF3]
Coordinates
chrLK035297:+:577..6478
Molecular Weight (calculated)
102405.0 Da
IEP (calculated)
5.992
GRAVY (calculated)
-0.292
Length
922 amino acids
Sequence
(BLAST)
001: MLKLFSSSTV SRAHHLTPAI RPGASSVESP LFKALSHLTG LNRRSTSLGG RRVFFCSDNA SDSSSAIVPT NPRPEDCLTV LALPVAHRPL FPGFYMPIYV
101: KDPKVLAALQ ESRRRQAPYA GAFLLKDDPS TDSSSSTEME KNINELKGKD LLKRLHEVGT LAQISSIQGD QVILVGHRRL RITEMVSEEP LTVKVDHLKD
201: KPFDMDDDVI KATSFEVIST LRDVLKTSSL WRDHVQTYTQ HIGEFTYPRL ADFGAAICGA NRHQAQEVLE ELDVHKRLRL TLELMKKERE ISKIQETIAK
301: AIEEKISGEQ RRYLLNEQLK AIKKELGVET DDKSALSEKF KERIDPNKEK IPAHVLQVIE EELTKLQLLE ASSSEFNVTR NYLDWLTILP WGNYSDENFD
401: VVRAQQILDE DHYGLSDVKE RILEFIAVGR LRGTSQGKII CLSGPPGVGK TSIGRSIARA LNRKFFRFSV GGLADVAEIK GHRRTYVGAM PGKMVQCLKS
501: VGTANPLVLI DEIDKLGRGH AGDPASALLE LLDPEQNANF LDHYLDVTID LSKVLFVCTA NVIDMIPNPL LDRMEVISIA GYITDEKVHI ARDYLEKTAR
601: GDCGIKPEQV EVSDAALLSL IENYCREAGV RNLQKQIEKI YRKIALKLVR EGVVPEEPAV AVDAEEAEIV TKLDVESTEN HVVEESPAPA AKEPKEETQN
701: EKKAIEKVMI DEPNLADYVG KPVFHAEKIY EPTPVGVVMG LAWTSMGGST LYIETTVVEE GEGKGCLNVT GQLGDVMKES AQIAHTVARK IMLEKEPENQ
801: FFANSKLHLH VPAGATPKDG PSAGCTMITS LLSLAMKKPV QKDLAMTGEV TLTGRILPIG GVKEKTIAAR RSQVKTIIFP EANRRDFDEL AENVKEGLDV
901: HFVDDYKKIF DLAFVSDNKQ QD
Best Arabidopsis Sequence Match ( AT5G26860.1 )
(BLAST)
001: MKGFDTNLRL QASSPEFSNG FLPKRQNFIK LNRRNCYPRS SFSPTMLKLF TSSASRVHHL TPVSRVVGSS PVESPLFKAL SQITGWNRRS TSLGHRAFFC
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED
Arabidopsis Description
LON_ARA_ARAlon protease 1 [Source:TAIR;Acc:AT5G26860]
SUBAcon: [cytosol,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.