CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22819	Canola	mitochondrion	61.45	73.6
CDY22821	Canola	mitochondrion	78.57	65.24
KRH55202	Soybean	cytosol	16.01	56.28
HORVU1Hr1G055380.1	Barley	cytosol	18.23	55.85
CDX80598	Canola	plastid	46.43	52.0
CDX88247	Canola	plastid	45.81	51.67
CDY22818	Canola	plastid	53.82	51.65
AT3G05790.1	Thale cress	plastid	52.09	44.9
CDY25198	Canola	cytosol, mitochondrion	24.01	44.42
CDY66499	Canola	plastid	48.77	42.95
CDY05546	Canola	plastid	48.77	42.81
CDY18823	Canola	plastid	46.92	41.78
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	48.4	40.18
Os03t0306400-01	Rice	plasma membrane	3.57	39.73
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	46.8	38.74
HORVU2Hr1G016000.1	Barley	plastid	46.67	38.63
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	46.67	38.63
TraesCS2A01G095500.1	Wheat	plastid	46.67	38.63
EER97776	Sorghum	plastid	46.43	38.08
KXG39532	Sorghum	mitochondrion	45.57	36.13
CDY33341	Canola	plastid	8.87	35.64
CDY18802	Canola	cytosol	21.31	34.95
CDY66234	Canola	plastid	8.13	33.67
CDX99569	Canola	plastid	9.98	33.2
Os07t0689300-01	Rice	mitochondrion	16.26	27.97
CDY25202	Canola	cytosol	37.56	27.09
CDY33510	Canola	mitochondrion, peroxisome	24.63	22.55
CDX77732	Canola	mitochondrion, peroxisome	24.38	22.32
CDX87027	Canola	mitochondrion	3.82	18.56
CDX88248	Canola	cytosol	1.6	17.11
CDX80599	Canola	cytosol	1.6	16.88
CDY18803	Canola	cytosol	2.96	16.78
CDY68112	Canola	cytosol	1.6	15.66
CDY22820	Canola	cytosol	1.6	15.66
CDY25200	Canola	cytosol	1.48	14.46
CDX80228	Canola	endoplasmic reticulum, extracellular, mitochondrion, nucleus	3.33	11.3

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.4.2.4	Gene3D:2.30.130.40	Gene3D:3.40.50.300	GO:A0A078GIV1	UniProt:A0A078GIV1
InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	EnsemblPlants:CDY25199	ProteinID:CDY25199	ProteinID:CDY25199.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488	GO:GO:0005524
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009056
GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	EnsemblPlantsGene:GSBRNA2T00029159001	InterPro:IPR003111	InterPro:Lon_Prtase
InterPro:Lon_bac/euk-typ	InterPro:Lon_substr-bd	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02190	PIRSF:PIRSF001174
PFscan:PS51787	PANTHER:PTHR43718	PANTHER:PTHR43718:SF2	InterPro:PUA-like_sf	SMART:SM00382	SMART:SM00464
SUPFAM:SSF52540	SUPFAM:SSF88697	UniParc:UPI0004EE13E4	SEG:seg	:	:

Description

BnaC06g04240DLon protease homolog [Source:UniProtKB/TrEMBL;Acc:A0A078GIV1]

Coordinates

chrLK032170:+:355496..360342

Molecular Weight (calculated)

90627.7 Da

IEP (calculated)

7.542

GRAVY (calculated)

-0.322

Length

812 amino acids

Sequence
(BLAST)

001: MLKLFTSHHV ASRCRNRNSH KLARRAFFST LTDSKPTDTV SAKPCLEDCQ TVVALPLLRK PLIPGFYMPL FVNDPKVLAA LQESKSGQAP YAGAFLLKDD
101: KYSSTASSSS SFETVNILDR LKGKESLNKI HQVGTLAQIL SIQGEQVILI GRKRLQITEM QSEDPLTVQT HHIKDKPYDK DDEVIIKATY FEVISMLRDV
201: LETTSLWRDQ VQTYTQDIGG SNYRKLAETI LQKRRRKFTG FGAGIFDAND LNYKKLTGFG AGVFDANDLN YKKLADFGAG ISGANKHKIQ EVLEELDVHK
301: RLVLVKKQVE VNKIQVFHAS IFPESTAKTV EDKQEESGSA KYVKKTRPSD KFRERVDIKL SLEEIPKHVV KVMEEKFEKL DRGEKDCRST DSIYNYLDWL
401: TALPWGECSN DSFDVLRAEK ILDEDHYGLH DVKERILEFI AVGTLTSNPQ GRIICLSGPP GVGKTSIARS VARALNRKFF RLAVGGLSDS SEIKGERGIY
501: IGAAPGKMVQ CLKEVGTENP LVLFDEIDKL GKSSRDDPEG ALLELLDPQQ NTHFLDYFLD VTIDLSKVLF VCTANDTYKI SGPLLDRMEV TELAGYTTDE
601: KMHIARDYLL KNVKRKCGIK PEQVDVSDTA LLSLIENYCG EAGVRNLQKH IEKIFRKIAL KLVRQQAFAK AAMTDLKSSE TAAEGSIELT NEYLRLADVL
701: KVFEYAVGGG PTREKSREIA LKLGRQQAST KAAMTDLKSS ETAAEGSIEL TNEYLRLADV LKVFEYAVGG AVPEFTIDAS NLADYVGKPV FRGEKIYEQT
801: PVGVVMASFT CS

Best Arabidopsis Sequence Match ( AT3G05780.1 )
(BLAST)

001: MMPKRFNTSG FDTTLRLPSY YGFLHLTQSL TLNSRVFYGA RHVTPPAIRI GSNPVQSLLL FRAPTQLTGW NRSSRDLLGR RVSFSDRSDG VDLLSSSPIL
101: STNPNLDDSL TVIALPLPHK PLIPGFYMPI HVKDPKVLAA LQESTRQQSP YVGAFLLKDC ASTDSSSRSE TEDNVVEKFK VKGKPKKKRR KELLNRIHQV
201: GTLAQISSIQ GEQVILVGRR RLIIEEMVSE DPLTVRVDHL KDKPYDKDNA VIKASYVEVI STLREVLKTN SLWRDQDIGD FSYQHLADFG AGISGANKHK
301: NQGVLTELDV HKRLELTLEL VKKQVEINKI KETDDGSSLS AKIRVRIDTK RDKIPKHVIK VMEEEFTKLE MLEENYSDFD LTYNYLHWLT VLPWGNFSYE
401: NFDVLRAKKI LDEDHYGLSD VKERILEFIA VGRLRGTSQG KIICLSGPPG VGKTSIGRSI ARALDRKFFR FSVGGLSDVA EIKGHCQTYV GAMPGKMVQC
501: LKSVGTANPL ILFDEIDKLG RCHTGDPASA LLEVMDPEQN AKFLDHFLNV TIDLSKVLFV CTANVIEMIP GPLLDRMEVI DLSGYVTDEK MHIARDYLVK
601: KTCRDCGIKP EHVDLSDAAL LSLIENYCRE AGVRNLQKQI EKIYRKVALE LVRQGAVSFD VTDTKDTKSL AKTDSEVKRM KVADIMKILE SATGDSTESK
701: TKQSGLVAKT FEKVMIDESN LADYVGKPVF QEEKIYEQTP VGVVMGLAWT SMGGSTLYIE TTFVEEGLGK GGLHITGQLG DVMKESAQIA HTVARRIMFE
801: KEPENLFFAN SKLHLHVPEG ATPKDGPSAG CTMITSFLSL AMKKLVRKDL AMTGEVTLTG RILPIGGVKE KTIAARRSQI KTIIFPEANR RDFEELAENM
901: KEGLDVHFVD EYEKIFDLAF NYDH

Arabidopsis Description

LON3Lon protease homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M9L8]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.