CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018887.1-P	Field mustard	mitochondrion	89.82	86.75
CDY25199	Canola	mitochondrion	73.6	61.45
HORVU1Hr1G055380.1	Barley	cytosol	22.86	58.49
KRH55202	Soybean	cytosol	19.91	58.44
CDY25198	Canola	cytosol, mitochondrion	33.78	52.16
CDY22818	Canola	plastid	65.04	52.13
CDX80598	Canola	plastid	54.87	51.31
CDX88247	Canola	plastid	53.54	50.42
CDY22821	Canola	mitochondrion	71.53	49.59
AT3G05790.1	Thale cress	plastid	59.73	42.99
CDY05546	Canola	plastid	56.49	41.41
CDY66499	Canola	plastid	56.05	41.21
CDY18823	Canola	plastid	54.28	40.35
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	55.16	38.24
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	53.1	36.7
HORVU2Hr1G016000.1	Barley	plastid	53.1	36.7
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	53.1	36.7
TraesCS2A01G095500.1	Wheat	plastid	52.95	36.6
EER97776	Sorghum	plastid	52.65	36.06
Os03t0306400-01	Rice	plasma membrane	3.83	35.62
KXG39532	Sorghum	mitochondrion	52.36	34.67
CDY33341	Canola	plastid	9.88	33.17
CDY18802	Canola	cytosol	24.04	32.93
CDX99569	Canola	plastid	11.36	31.56
CDY66234	Canola	plastid	8.85	30.61
CDY25202	Canola	cytosol	48.97	29.48
Os07t0689300-01	Rice	mitochondrion	17.55	25.21
CDY33510	Canola	mitochondrion, peroxisome	27.58	21.08
CDX77732	Canola	mitochondrion, peroxisome	27.29	20.86
CDY18803	Canola	cytosol	3.39	16.08
CDX87027	Canola	mitochondrion	3.69	14.97
CDX88248	Canola	cytosol	1.33	11.84
CDX80228	Canola	endoplasmic reticulum, extracellular, mitochondrion, nucleus	4.13	11.72
CDX80599	Canola	cytosol	1.33	11.69
CDY68112	Canola	cytosol	1.33	10.84
CDY25200	Canola	cytosol	1.33	10.84
CDY22820	Canola	cytosol	1.33	10.84

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.4.2.4	Gene3D:2.30.130.40	Gene3D:3.40.50.300	GO:A0A078GBU6	UniProt:A0A078GBU6
InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	EnsemblPlants:CDY22819	ProteinID:CDY22819	ProteinID:CDY22819.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488	GO:GO:0005524
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538
GO:GO:0030163	EnsemblPlantsGene:GSBRNA2T00021165001	InterPro:IPR003111	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ	InterPro:Lon_substr-bd
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02190	PIRSF:PIRSF001174	PFscan:PS51787	PANTHER:PTHR43718
PANTHER:PTHR43718:SF2	InterPro:PUA-like_sf	SMART:SM00382	SMART:SM00464	SUPFAM:SSF52540	SUPFAM:SSF88697
UniParc:UPI0004EEF98B	SEG:seg	:	:	:	:

Description

BnaA06g02580DBnaA06g02580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBU6]

Coordinates

chrLK032136:+:329981..334312

Molecular Weight (calculated)

76506.5 Da

IEP (calculated)

8.427

GRAVY (calculated)

-0.322

Length

678 amino acids

Sequence
(BLAST)

001: MLKLFTSHHV TSRLRNRSSH KLARRAFLTT LTDSKPTDTV SAKPCIDDCQ TVVALPLLRE PLIPGFYMPL YVKDPKVLAA LQESKSGQAP YAGAFLLKDD
101: KYASTASSYY GFETVNILDK LKGKELLKKI YQVGTCSGYI PYILSIQGKQ VILVGRKRLQ ITEMVNRNPL TVKAQHIKDK PYDKDDEVIK ATYIEVIGDS
201: NYRKLAEFLL QKRRRNFTGL RAGIFDATDF NYQKLADFGA GICGANKHKI QEVLEELDIH KRLDLVKKLV EITKIREFHA SIFPVTYATA EDKKEEYGSA
301: EYVKQNRLSD TFRKRIEPIK EKIPKHVLEV IEEELANLDR KEYGFGSTDS IYSYLDWLTA LPWGNCSDEN FDVLRAEKIL DEDHYGLHVV KERILEFIAV
401: ANLTGNPEGR KIICLSGPPG VGKTSVARSV ARALGRKFFR LAVGGLSDSS EIKGDRRVYI GATPGKMVQC LKEVGTENPL VLLDEIDKLG NSCRDPEGAL
501: LELLDPEQNA HFLDYFLDVP IDLSKVLFVC TANNIDRLPG PLLDRMEVIE LAGYTADEKM HIARDYLVKI VQRKCGMKPE QVNVMSDAAL LSLIENYCRE
601: AGVRNLQKQI EKIFRKIALK LVRQQASAKA AMVDLESSET AAEGSIELTN EYLRLADVLK CDERKRRDSS HSCQKNNV

Best Arabidopsis Sequence Match ( AT3G05780.1 )
(BLAST)

001: MMPKRFNTSG FDTTLRLPSY YGFLHLTQSL TLNSRVFYGA RHVTPPAIRI GSNPVQSLLL FRAPTQLTGW NRSSRDLLGR RVSFSDRSDG VDLLSSSPIL
101: STNPNLDDSL TVIALPLPHK PLIPGFYMPI HVKDPKVLAA LQESTRQQSP YVGAFLLKDC ASTDSSSRSE TEDNVVEKFK VKGKPKKKRR KELLNRIHQV
201: GTLAQISSIQ GEQVILVGRR RLIIEEMVSE DPLTVRVDHL KDKPYDKDNA VIKASYVEVI STLREVLKTN SLWRDQDIGD FSYQHLADFG AGISGANKHK
301: NQGVLTELDV HKRLELTLEL VKKQVEINKI KETDDGSSLS AKIRVRIDTK RDKIPKHVIK VMEEEFTKLE MLEENYSDFD LTYNYLHWLT VLPWGNFSYE
401: NFDVLRAKKI LDEDHYGLSD VKERILEFIA VGRLRGTSQG KIICLSGPPG VGKTSIGRSI ARALDRKFFR FSVGGLSDVA EIKGHCQTYV GAMPGKMVQC
501: LKSVGTANPL ILFDEIDKLG RCHTGDPASA LLEVMDPEQN AKFLDHFLNV TIDLSKVLFV CTANVIEMIP GPLLDRMEVI DLSGYVTDEK MHIARDYLVK
601: KTCRDCGIKP EHVDLSDAAL LSLIENYCRE AGVRNLQKQI EKIYRKVALE LVRQGAVSFD VTDTKDTKSL AKTDSEVKRM KVADIMKILE SATGDSTESK
701: TKQSGLVAKT FEKVMIDESN LADYVGKPVF QEEKIYEQTP VGVVMGLAWT SMGGSTLYIE TTFVEEGLGK GGLHITGQLG DVMKESAQIA HTVARRIMFE
801: KEPENLFFAN SKLHLHVPEG ATPKDGPSAG CTMITSFLSL AMKKLVRKDL AMTGEVTLTG RILPIGGVKE KTIAARRSQI KTIIFPEANR RDFEELAENM
901: KEGLDVHFVD EYEKIFDLAF NYDH

Arabidopsis Description

LON3Lon protease homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M9L8]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.