CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

plastid 2
peroxisome 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024968.1-P	Field mustard	mitochondrion	98.2	98.2
CDX77732	Canola	mitochondrion, peroxisome	97.75	97.75
AT5G47040.1	Thale cress	mitochondrion, peroxisome	95.94	95.83
VIT_02s0012g00310.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	84.22	84.12
PGSC0003DMT400004645	Potato	cytosol, mitochondrion, peroxisome, plastid	80.95	81.87
Solyc08g077440.2.1	Tomato	plastid	80.95	81.87
KRH04278	Soybean	cytosol, mitochondrion, peroxisome, plastid	81.74	81.83
KRH57559	Soybean	cytosol, mitochondrion, peroxisome, plastid	80.95	81.13
KRH77266	Soybean	mitochondrion	81.06	80.88
GSMUA_Achr1P07700_001	Banana	cytosol, mitochondrion, peroxisome, plastid	79.71	79.53
EER99247	Sorghum	plastid	79.26	79.44
TraesCS5B01G322000.2	Wheat	cytosol	77.68	77.77
TraesCS5D01G328300.2	Wheat	plastid	77.56	77.65
TraesCS5A01G321500.1	Wheat	cytosol	77.45	77.54
GSMUA_Achr2P03430_001	Banana	mitochondrion	77.23	77.23
Os09t0533400-01	Rice	mitochondrion	25.7	76.51
HORVU5Hr1G081930.2	Barley	cytosol, plastid	77.23	75.77
Zm00001d021301_P002	Maize	peroxisome	78.81	72.29
Zm00001d006214_P002	Maize	plasma membrane	64.04	56.13
CDY22820	Canola	cytosol	3.72	39.76
CDY25200	Canola	cytosol	3.72	39.76
CDY68112	Canola	cytosol	3.72	39.76
CDY25198	Canola	cytosol, mitochondrion	18.71	37.81
CDX88248	Canola	cytosol	3.16	36.84
CDX80599	Canola	cytosol	3.16	36.36
CDY18802	Canola	cytosol	19.73	35.35
CDX87027	Canola	mitochondrion	6.54	34.73
CDY18823	Canola	plastid	32.02	31.14
CDY66499	Canola	plastid	32.24	31.02
CDY05546	Canola	plastid	32.24	30.92
CDY22818	Canola	plastid	28.07	29.43
CDY18803	Canola	cytosol	4.74	29.37
CDX88247	Canola	plastid	23.34	28.75
CDX80598	Canola	plastid	23.34	28.55
CDY22819	Canola	mitochondrion	21.08	27.58
CDY22821	Canola	mitochondrion	29.76	26.99
CDY25199	Canola	mitochondrion	22.55	24.63
CDY25202	Canola	cytosol	28.86	22.74
CDX99569	Canola	plastid	4.74	17.21
CDX80228	Canola	endoplasmic reticulum, extracellular, mitochondrion, nucleus	4.17	15.48
CDY33341	Canola	plastid	2.93	12.87
CDY66234	Canola	plastid	2.37	10.71

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	MapMan:19.4.2.4	Gene3D:3.30.230.10	Gene3D:3.40.50.300	GO:A0A078H4G6
UniProt:A0A078H4G6	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	EnsemblPlants:CDY33510	ProteinID:CDY33510	ProteinID:CDY33510.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0005782	GO:GO:0006508	GO:GO:0006515	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009056	GO:GO:0009987	GO:GO:0016043
GO:GO:0016485	GO:GO:0016558	GO:GO:0016787	GO:GO:0016887	GO:GO:0019538	GO:GO:0030163
EnsemblPlantsGene:GSBRNA2T00054762001	InterPro:IPR003111	InterPro:IPR008269	InterPro:IPR014721	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ
InterPro:Lon_proteolytic	InterPro:Lon_substr-bd	InterPro:Lonp2_euk	HAMAP:MF_03121	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF02190	PFAM:PF05362	PIRSF:PIRSF001174	PRINTS:PR00830	ScanProsite:PS01046	PFscan:PS51786
PFscan:PS51787	PANTHER:PTHR10046	PANTHER:PTHR10046:SF24	InterPro:PUA-like_sf	InterPro:Peptidase_S16_AS	InterPro:Ribosomal_S5_D2-typ_fold
InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00382	SMART:SM00464	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF88697
TIGRFAMs:TIGR00763	UniParc:UPI0004EE3054	SEG:seg	:	:	:

Description

BnaA06g35630DLon protease homolog 2, peroxisomal [Source:UniProtKB/TrEMBL;Acc:A0A078H4G6]

Coordinates

chrLK032315:-:341517..346938

Molecular Weight (calculated)

97759.3 Da

IEP (calculated)

7.001

GRAVY (calculated)

-0.245

Length

887 amino acids

Sequence
(BLAST)

001: MADNVELPSR LAILPFRNKV LLPGAIIRIR CTSHSSVTLV EQELWQKEEK GLIGILPVRD DAEGSSIGTM INPGGGSDSG ERSLKFLVGT TDAQKSDAKD
101: QQEVHWHSRG VAARALHLSR GVEKPSGRVT YVVVLEGLSR FNVQELGKRG PYSVARITSL EMTKGELEQV EHDPDFVALS RQFKTTAMEL VSVLEQKQKT
201: GGRTKVLLET VPIHKLADIF VASFEMSFEE QLSMLDSVDL KVRLSKATEL VDRHLQSIRV AEKITQKVEG QLSKSQKEYL LRQQMRAIKE ELGDNDDDED
301: DVAALERKMQ AAGMPSNIWK HAQRELRRLK KMQPQQPGYN SSRVYLELLA DLPWEKASEE HELDLKAAKE RLDSDHYGLA KVKQRIIEYL AVRKLKPDAR
401: GPVLCFVGPP GVGKTSLASS IAAALGRKFV RLSLGGVKDE ADIRGHRRTY IGSMPGRLID GLKRVGVCNP VMLLDEIDKT GSDVRGDPAS ALLEVLDPEQ
501: NKSFNDHYLN VPYDLSKVVF VATANRVQPI PPPLLDRMEL IELPGYTQEE KLKIAMRHLI PRVLDQHGLT SEFLKIPEAM VKNIIQRYTR EAGVRSLERN
601: LAAVARAAAV MVAEHEQTLP VSKDVQKLAS PLLNGRMAEG GEVEMEVIPM GENDHEIGST FQSPSTLVVD ETMLEKILGP PRFDDSEAAD RVASAGVSVG
701: LVWTTFGGEV QFVEATSMVG KGELHLTGQL GDVIKESAQL ALTWVRARAS DFKLALAGDM NVLDGRDIHI HFPAGAVPKD GPSAGVTLVT ALVSLFSQKR
801: VRADTAMTGE MTLRGLVLPV GGIKDKILAA HRYGIKRVIL PQRNSKDLVE VPAAVLSSLE VILAKRMEDV LENAFEGGCP WRNHSKL

Best Arabidopsis Sequence Match ( AT5G47040.1 )
(BLAST)

001: MAETVELPSR LAILPFRNKV LLPGAIIRIR CTSHSSVTLV EQELWQKEEK GLIGILPVRD DAEGSSIGTM INPGAGSDSG ERSLKFLVGT TDAQKSDAKD
101: QQDLQWHTRG VAARALHLSR GVEKPSGRVT YVVVLEGLSR FNVQELGKRG PYSVARITSL EMTKAELEQV KQDPDFVALS RQFKTTAMEL VSVLEQKQKT
201: GGRTKVLLET VPIHKLADIF VASFEMSFEE QLSMLDSVDL KVRLSKATEL VDRHLQSIRV AEKITQKVEG QLSKSQKEYL LRQQMRAIKE ELGDNDDDED
301: DVAALERKMQ AAGMPSNIWK HAQRELRRLK KMQPQQPGYN SSRVYLELLA DLPWDKASEE HELDLKAAKE RLDSDHYGLA KVKQRIIEYL AVRKLKPDAR
401: GPVLCFVGPP GVGKTSLASS IAAALGRKFV RLSLGGVKDE ADIRGHRRTY IGSMPGRLID GLKRVGVCNP VMLLDEIDKT GSDVRGDPAS ALLEVLDPEQ
501: NKSFNDHYLN VPYDLSKVVF VATANRVQPI PPPLLDRMEL IELPGYTQEE KLKIAMRHLI PRVLDQHGLS SEFLKIPEAM VKNIIQRYTR EAGVRSLERN
601: LAALARAAAV MVAEHEQSLP LSKDVQKLTS PLLNGRMAEG GEVEMEVIPM GVNDHEIGGT FQSPSALVVD ETMLEKILGP PRFDDSEAAD RVASAGVSVG
701: LVWTTFGGEV QFVEATSMVG KGEMHLTGQL GDVIKESAQL ALTWVRARAS DFKLALAGDM NVLDGRDIHI HFPAGAVPKD GPSAGVTLVT ALVSLFSQKR
801: VRADTAMTGE MTLRGLVLPV GGIKDKILAA HRYGIKRVIL PQRNSKDLVE VPAAVLSSLE VILAKRMEDV LENAFEGGCP WRNNYSKL

Arabidopsis Description

LON2Lon protease homolog 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O64948]
SUBAcon: [mitochondrion,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.