CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 4
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57559	Soybean	cytosol, mitochondrion, peroxisome, plastid	97.18	97.29
KRH77266	Soybean	mitochondrion	90.41	90.1
VIT_02s0012g00310.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	85.89	85.7
PGSC0003DMT400004645	Potato	cytosol, mitochondrion, peroxisome, plastid	83.97	84.83
Solyc08g077440.2.1	Tomato	plastid	83.75	84.61
CDX77732	Canola	mitochondrion, peroxisome	82.17	82.07
Bra024968.1-P	Field mustard	mitochondrion	82.05	81.96
AT5G47040.1	Thale cress	mitochondrion, peroxisome	82.05	81.87
CDY33510	Canola	mitochondrion, peroxisome	81.83	81.74
EER99247	Sorghum	plastid	80.81	80.9
GSMUA_Achr1P07700_001	Banana	cytosol, mitochondrion, peroxisome, plastid	80.14	79.86
TraesCS5B01G322000.2	Wheat	cytosol	79.46	79.46
TraesCS5A01G321500.1	Wheat	cytosol	79.35	79.35
TraesCS5D01G328300.2	Wheat	plastid	79.35	79.35
Os09t0533400-01	Rice	mitochondrion	26.19	77.85
HORVU5Hr1G081930.2	Barley	cytosol, plastid	79.12	77.54
GSMUA_Achr2P03430_001	Banana	mitochondrion	77.43	77.34
Zm00001d021301_P002	Maize	peroxisome	80.93	74.15
Zm00001d006214_P002	Maize	plasma membrane	65.01	56.92
KRH55202	Soybean	cytosol	10.72	41.13
KRH33822	Soybean	mitochondrion	32.96	30.39
KRG90539	Soybean	mitochondrion	32.84	29.6

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	EntrezGene:100789982	MapMan:19.4.2.4	Gene3D:3.30.230.10	Gene3D:3.40.50.300
InterPro:AAA+_ATPase	EMBL:ACUP02010395	InterPro:ATPase_AAA_core	ncoils:Coil	EnsemblPlantsGene:GLYMA_17G151100	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0005782
GO:GO:0006508	GO:GO:0006515	GO:GO:0006625	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0008236	GO:GO:0009056	GO:GO:0009987	GO:GO:0016043	GO:GO:0016485
GO:GO:0016558	GO:GO:0016787	GO:GO:0016887	GO:GO:0019538	GO:GO:0030163	UniProt:I1MVB0
InterPro:IPR003111	InterPro:IPR008269	InterPro:IPR014721	EnsemblPlants:KRH04278	ProteinID:KRH04278	ProteinID:KRH04278.1
InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ	InterPro:Lon_proteolytic	InterPro:Lon_substr-bd	InterPro:Lonp2_euk	HAMAP:MF_03121
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02190	PFAM:PF05362	PIRSF:PIRSF001174	PRINTS:PR00830
ScanProsite:PS01046	PFscan:PS51786	PFscan:PS51787	PANTHER:PTHR10046	PANTHER:PTHR10046:SF24	InterPro:PUA-like_sf
InterPro:Peptidase_S16_AS	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	MEROPS:S16.003	SMART:SM00382	SMART:SM00464
SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF88697	TIGRFAMs:TIGR00763	UniParc:UPI000233EC30	SEG:seg

Description

hypothetical protein

Coordinates

chr17:+:12592688..12603310

Molecular Weight (calculated)

98250.4 Da

IEP (calculated)

8.446

GRAVY (calculated)

-0.204

Length

886 amino acids

Sequence
(BLAST)

001: MAESVELPSR LAILPFRNKV LLPGAIIRIR CTSPTSVKLV EQELWQREEK GLIGILPVRD VVEIKPVGPT VSEGADSTNQ NSKVQGGSLD SRKLDTKKQN
101: DVVHWHNRGV AARPLHLSRG VEKPSGRVTY TVVLEGLCRF SVQELSTRGI YHTARITSLE MTKTELEQVE QDPDFIMLSR QFKATAMELI SILELKQKTG
201: GRTKVLLDNV PVHKLADIFV ASFEISFEEQ LSMLDSVDPK VRLSKATELV DRHLQSIRVA EKITQKVEGQ LSKSQKEFLL RQQIRAIKEE LGDNDDDEDD
301: LAALERKMQS AGMPQNIWKH AHRELRRLKK MQPQQPGYNS SRVYLELISD LPWQKASEEI ELDLRAAQKR LDSDHYGLVK VKQRIIEYLA VRKLKPDARG
401: PVLCFVGPPG VGKTSLASSI AAALGRKFVR ISLGGVKDEA DIRGHRRTYV GSMPGRLIDG LKRVAVCNPV MLLDEVDKTG SDIRGDPASA LLEVLDPEQN
501: KSFNDHYLNV PFDLSKVVFV ATANRLQPIP PPLRDRMEII ELPGYTPEEK LHIAMRHLIP RVLDQHGLSS EFLQIPEAMV KLVIQRYTRE AGVRNLERNL
601: AALARAAAVI VLEQEQVVPL NKGMQGLATP LVENRLADGT EVEMEVIPMG VNSRDISSTF RIASPLVVDE TMLEKVLGPP RFDGREAAER VATPGVSVGL
701: VWTAFGGEVQ FVEATAMVGK GELHLTGQLG DVIKESAQIA LTWVRARATD LRLAATEGFN ILEGRDVHIH FPAGAVPKDG PSAGVTLVTA LVSLFSQQRV
801: RSDTAMTGEM TLRGLVLPVG GVKDKILAAH RYGIKRVILP ERNLKDLVEV PSSVLSNLEV LLAKRVEDVL EHAFDGGCPW RQHSKL

Best Arabidopsis Sequence Match ( AT5G47040.1 )
(BLAST)

001: MAETVELPSR LAILPFRNKV LLPGAIIRIR CTSHSSVTLV EQELWQKEEK GLIGILPVRD DAEGSSIGTM INPGAGSDSG ERSLKFLVGT TDAQKSDAKD
101: QQDLQWHTRG VAARALHLSR GVEKPSGRVT YVVVLEGLSR FNVQELGKRG PYSVARITSL EMTKAELEQV KQDPDFVALS RQFKTTAMEL VSVLEQKQKT
201: GGRTKVLLET VPIHKLADIF VASFEMSFEE QLSMLDSVDL KVRLSKATEL VDRHLQSIRV AEKITQKVEG QLSKSQKEYL LRQQMRAIKE ELGDNDDDED
301: DVAALERKMQ AAGMPSNIWK HAQRELRRLK KMQPQQPGYN SSRVYLELLA DLPWDKASEE HELDLKAAKE RLDSDHYGLA KVKQRIIEYL AVRKLKPDAR
401: GPVLCFVGPP GVGKTSLASS IAAALGRKFV RLSLGGVKDE ADIRGHRRTY IGSMPGRLID GLKRVGVCNP VMLLDEIDKT GSDVRGDPAS ALLEVLDPEQ
501: NKSFNDHYLN VPYDLSKVVF VATANRVQPI PPPLLDRMEL IELPGYTQEE KLKIAMRHLI PRVLDQHGLS SEFLKIPEAM VKNIIQRYTR EAGVRSLERN
601: LAALARAAAV MVAEHEQSLP LSKDVQKLTS PLLNGRMAEG GEVEMEVIPM GVNDHEIGGT FQSPSALVVD ETMLEKILGP PRFDDSEAAD RVASAGVSVG
701: LVWTTFGGEV QFVEATSMVG KGEMHLTGQL GDVIKESAQL ALTWVRARAS DFKLALAGDM NVLDGRDIHI HFPAGAVPKD GPSAGVTLVT ALVSLFSQKR
801: VRADTAMTGE MTLRGLVLPV GGIKDKILAA HRYGIKRVIL PQRNSKDLVE VPAAVLSSLE VILAKRMEDV LENAFEGGCP WRNNYSKL

Arabidopsis Description

LON2Lon protease homolog 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O64948]
SUBAcon: [mitochondrion,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.