CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 3
plastid 3
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0533400-01	Rice	mitochondrion	31.98	94.97
TraesCS5B01G322000.2	Wheat	cytosol	93.22	93.12
TraesCS5D01G328300.2	Wheat	plastid	93.11	93.0
TraesCS5A01G321500.1	Wheat	cytosol	92.88	92.78
HORVU5Hr1G081930.2	Barley	cytosol, plastid	92.66	90.71
Zm00001d021301_P002	Maize	peroxisome	97.85	89.56
GSMUA_Achr1P07700_001	Banana	cytosol, mitochondrion, peroxisome, plastid	84.41	84.03
VIT_02s0012g00310.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	82.94	82.66
PGSC0003DMT400004645	Potato	cytosol, mitochondrion, peroxisome, plastid	81.24	81.98
KRH77266	Soybean	mitochondrion	81.92	81.55
Solyc08g077440.2.1	Tomato	plastid	80.79	81.53
GSMUA_Achr2P03430_001	Banana	mitochondrion	81.02	80.83
KRH04278	Soybean	cytosol, mitochondrion, peroxisome, plastid	80.9	80.81
KRH57559	Soybean	cytosol, mitochondrion, peroxisome, plastid	80.79	80.79
CDX77732	Canola	mitochondrion, peroxisome	80.23	80.05
Bra024968.1-P	Field mustard	mitochondrion	80.0	79.82
AT5G47040.1	Thale cress	mitochondrion, peroxisome	80.0	79.73
CDY33510	Canola	mitochondrion, peroxisome	79.44	79.26
Zm00001d006214_P002	Maize	plasma membrane	78.31	68.48
EER97776	Sorghum	plastid	33.11	29.6
KXG39532	Sorghum	mitochondrion	33.11	28.61

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	MapMan:19.4.2.4	Gene3D:3.30.230.10	Gene3D:3.40.50.300	EntrezGene:8063307
InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	UniProt:C5X686	ncoils:Coil	EnsemblPlants:EER99247	ProteinID:EER99247
ProteinID:EER99247.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0005782	GO:GO:0006508	GO:GO:0006515	GO:GO:0006625	GO:GO:0006810
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009056
GO:GO:0009791	GO:GO:0009987	GO:GO:0016043	GO:GO:0016485	GO:GO:0016558	GO:GO:0016560
GO:GO:0016787	GO:GO:0016887	GO:GO:0019538	GO:GO:0030163	GO:GO:0040007	GO:GO:0043233
GO:GO:0048527	InterPro:IPR003111	InterPro:IPR008269	InterPro:IPR014721	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ
InterPro:Lon_proteolytic	InterPro:Lon_substr-bd	InterPro:Lonp2_euk	HAMAP:MF_03121	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF02190	PFAM:PF05362	PIRSF:PIRSF001174	PRINTS:PR00830	ScanProsite:PS01046	PFscan:PS51786
PFscan:PS51787	PANTHER:PTHR10046	PANTHER:PTHR10046:SF24	InterPro:PUA-like_sf	InterPro:Peptidase_S16_AS	InterPro:Ribosomal_S5_D2-typ_fold
InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00382	SMART:SM00464	EnsemblPlantsGene:SORBI_3002G276100	SUPFAM:SSF52540	SUPFAM:SSF54211
SUPFAM:SSF88697	unigene:Sbi.10045	TIGRFAMs:TIGR00763	UniParc:UPI0001A83D76	RefSeq:XP_002462726.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:65880980..65890103

Molecular Weight (calculated)

97472.3 Da

IEP (calculated)

7.775

GRAVY (calculated)

-0.225

Length

885 amino acids

Sequence
(BLAST)

001: MADAPVELPS RLAILPFRNK VLLPGAIVRI RCTNPSSVKL VEQELWQKEE KGLIGVLPVR DSEATAVGSL LSPGVGSDSG EGGSKAGGSA GESSRQDTKN
101: GKDPIHWHSK GVAARALHLS RGVEKPSGRV TYIVVLEGLC RFNVQELSAR GPYHVARVSR LDMTKIELDQ AEQDPDLIAL SRQFKATAME LISVLEQKQK
201: TVGRTKVLLD TVPVYRLADI FVASFEISFE EQLSMLDSVD LKVRLSKATE LVDRHLQSIL VAEKITQKVE GQLSKSQKEF LLRQQMRAIK EELGDNDDDE
301: DDVAALERKM QNAGMPANIW KHAQREMRRL RKMQPQQPGY SSSRAYLELV ADLPWQKVSE ERELDLRAAK ESLDQDHYGL TKVKQRIIEY LAVRKLKPDA
401: RGPVLCFVGP PGVGKTSLAS SIAKALNRKF IRISLGGVKD EADIRGHRRT YIGSMPGRLI DGLKRVSVSN PVMLLDEIDK TGSDVRGDPA SALLEVLDPE
501: QNKAFNDHYL NVPFDLSKVI FVATANRMQP IPPPLLDRME VIELPGYTPE EKLKIAMKHL IPRVLEQHGL SMTNLQIPEA MVKLIIERYT REAGVRNLER
601: NLAALARAAA VKVAEQVKTL RLGKEIQPIT TTLLDSRLAD GGEVEMEVIP MEHDISNTYE NPSPMIVDEA MLEKVLGPPR FDDREAADRV ASPGVSVGLV
701: WTSVGGEVQF VEATAMVGKG DLHLTGQLGD VIKESAQLAL TWVRARAADL NLSPTSDINL LESRDIHIHF PAGAVPKDGP SAGVTLVTAL VSLFSNRKVR
801: ADTAMTGEMT LRGLVLPVGG VKDKVLAAHR YGIKRVILPE RNLKDLSEVP SPILSGMEIL LVKRIEEVLD HAFEGGCPLR SRSKL

Best Arabidopsis Sequence Match ( AT5G47040.1 )
(BLAST)

001: MAETVELPSR LAILPFRNKV LLPGAIIRIR CTSHSSVTLV EQELWQKEEK GLIGILPVRD DAEGSSIGTM INPGAGSDSG ERSLKFLVGT TDAQKSDAKD
101: QQDLQWHTRG VAARALHLSR GVEKPSGRVT YVVVLEGLSR FNVQELGKRG PYSVARITSL EMTKAELEQV KQDPDFVALS RQFKTTAMEL VSVLEQKQKT
201: GGRTKVLLET VPIHKLADIF VASFEMSFEE QLSMLDSVDL KVRLSKATEL VDRHLQSIRV AEKITQKVEG QLSKSQKEYL LRQQMRAIKE ELGDNDDDED
301: DVAALERKMQ AAGMPSNIWK HAQRELRRLK KMQPQQPGYN SSRVYLELLA DLPWDKASEE HELDLKAAKE RLDSDHYGLA KVKQRIIEYL AVRKLKPDAR
401: GPVLCFVGPP GVGKTSLASS IAAALGRKFV RLSLGGVKDE ADIRGHRRTY IGSMPGRLID GLKRVGVCNP VMLLDEIDKT GSDVRGDPAS ALLEVLDPEQ
501: NKSFNDHYLN VPYDLSKVVF VATANRVQPI PPPLLDRMEL IELPGYTQEE KLKIAMRHLI PRVLDQHGLS SEFLKIPEAM VKNIIQRYTR EAGVRSLERN
601: LAALARAAAV MVAEHEQSLP LSKDVQKLTS PLLNGRMAEG GEVEMEVIPM GVNDHEIGGT FQSPSALVVD ETMLEKILGP PRFDDSEAAD RVASAGVSVG
701: LVWTTFGGEV QFVEATSMVG KGEMHLTGQL GDVIKESAQL ALTWVRARAS DFKLALAGDM NVLDGRDIHI HFPAGAVPKD GPSAGVTLVT ALVSLFSQKR
801: VRADTAMTGE MTLRGLVLPV GGIKDKILAA HRYGIKRVIL PQRNSKDLVE VPAAVLSSLE VILAKRMEDV LENAFEGGCP WRNNYSKL

Arabidopsis Description

LON2Lon protease homolog 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O64948]
SUBAcon: [mitochondrion,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.