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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • mitochondrion 1
  • cytosol 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:cytosol
TargetP:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G322000.2 Wheat cytosol 97.01 98.98
TraesCS5D01G328300.2 Wheat plastid 96.9 98.87
TraesCS5A01G321500.1 Wheat cytosol 96.68 98.65
Os09t0533400-01 Rice mitochondrion 30.75 93.29
EER99247 Sorghum plastid 90.71 92.66
Zm00001d021301_P002 Maize peroxisome 90.15 84.28
GSMUA_Achr1P07700_001 Banana cytosol, mitochondrion, peroxisome, plastid 81.08 82.45
VIT_02s0012g00310.t01 Wine grape cytosol, mitochondrion, peroxisome, plastid 79.98 81.42
PGSC0003DMT400004645 Potato cytosol, mitochondrion, peroxisome, plastid 78.1 80.5
Solyc08g077440.2.1 Tomato plastid 77.77 80.16
KRH77266 Soybean mitochondrion 78.43 79.75
GSMUA_Achr2P03430_001 Banana mitochondrion 78.21 79.71
KRH04278 Soybean cytosol, mitochondrion, peroxisome, plastid 77.54 79.12
KRH57559 Soybean cytosol, mitochondrion, peroxisome, plastid 77.43 79.1
CDX77732 Canola mitochondrion, peroxisome 76.44 77.9
Bra024968.1-P Field mustard mitochondrion 76.33 77.79
AT5G47040.1 Thale cress mitochondrion, peroxisome 76.22 77.59
CDY33510 Canola mitochondrion, peroxisome 75.77 77.23
Zm00001d006214_P002 Maize plasma membrane 73.01 65.22
HORVU1Hr1G055380.1 Barley cytosol 12.94 44.15
HORVU2Hr1G016000.1 Barley plastid 32.08 29.56
Protein Annotations
Gene3D:1.10.8.60Gene3D:1.20.58.1480MapMan:19.4.2.4Gene3D:3.30.230.10Gene3D:3.40.50.300UniProt:A0A287S0P9
InterPro:AAA+_ATPaseInterPro:ATPase_AAA_corencoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004176GO:GO:0004252GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005777GO:GO:0005782GO:GO:0006508GO:GO:0006515
GO:GO:0006810GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008236
GO:GO:0009056GO:GO:0009791GO:GO:0009987GO:GO:0016043GO:GO:0016485GO:GO:0016558
GO:GO:0016560GO:GO:0016787GO:GO:0016887GO:GO:0019538GO:GO:0030163GO:GO:0040007
GO:GO:0043233GO:GO:0048527EnsemblPlantsGene:HORVU5Hr1G081930EnsemblPlants:HORVU5Hr1G081930.2InterPro:IPR003111InterPro:IPR008269
InterPro:IPR014721InterPro:Lon_PrtaseInterPro:Lon_bac/euk-typInterPro:Lon_proteolyticInterPro:Lon_substr-bdInterPro:Lonp2_euk
HAMAP:MF_03121InterPro:P-loop_NTPasePFAM:PF00004PFAM:PF02190PFAM:PF05362PIRSF:PIRSF001174
PRINTS:PR00830ScanProsite:PS01046PFscan:PS51786PFscan:PS51787PANTHER:PTHR10046PANTHER:PTHR10046:SF24
InterPro:PUA-like_sfInterPro:Peptidase_S16_ASInterPro:Ribosomal_S5_D2-typ_foldInterPro:Ribosomal_S5_D2-typ_fold_subgrSMART:SM00382SMART:SM00464
SUPFAM:SSF52540SUPFAM:SSF54211SUPFAM:SSF88697TIGRFAMs:TIGR00763UniParc:UPI000B464DE9SEG:seg
Description
Lon protease homolog 2, peroxisomal [Source:UniProtKB/TrEMBL;Acc:A0A287S0P9]
Coordinates
chrchr5H:-:565945292..565953698
Molecular Weight (calculated)
98931.9 Da
IEP (calculated)
8.139
GRAVY (calculated)
-0.203
Length
904 amino acids
Sequence
(BLAST)
001: XXXXPAVRRT HHSSASAAMA DAPVELPGRL AILPFRNKVL LPGAIVRIRC TTPSSVKLVE QELWQREDKG LIGVLPVRDS EAAAVGSILS PGVGGDSGEG
101: GRRSPGASGG ESSKQDAKSG KEPIHWHSRG VAARALHLSR GVEKPSGRVT YIVVLEGLCR FSVEELNARG SYHVARVSRL DMTKTELEQV EQDPDLIALS
201: RQFKATAMEL ISVLEQKQKT VGRTKVLLET VPVYRLADIF VASFEISFEE QLAMLDSVDL KVRLSKATEL VDRHLQSILV AEKITQKVEG QLSKSQKEFL
301: LRQQMRAIKD ELGDNDDDED DIAALERKMQ NAGMPANIWK HAQRELRRLR KMQPQQPGYS SSRAYLELIA DLPWQKVSEE RELDLRAAKE SLDRDHYGLT
401: KVKQRIIEYL AVRKLKPDAR GPVLCFVGPP GVGKTSLATS IAKALNRKFI RISLGGVKDE ADIRGHRRTY IGSMPGRLID GLKRVSVSNP VMLLDEIDKT
501: GSDVRGDPAS ALLEVLDPEQ NKTFNDHYLN VPFDLSKVVF VATANRMQPI PPALLDRMEV IELPGYTPEE KLKIAMKHLL PRVLEQHGLS SAYLQIPEAV
601: VKLIIERYTR EAGVRNLERN LAALARAAAV KVAELDSTLR LGKEMQPITT TLLDSRLTDG GEVEMEVIPM GQDISNTYEN PSPMIIDEAV LEKVLGPPRF
701: DDREAADRVS SPGVSVGLVW TSFGGEVQFV EATAMVGKGD LHLTGQLGDV IKESAQLALT WVRARSADLN LSPTSDINIL ESRDIHIHFP AGAVPKDGPS
801: AGVTLVTSLV SLFSNRKVRA DTAMTGEMTL RGLVLPVGGV KDKVLAAHRY GIKRVILPER NLKDLAEIPA PILAGIEILL VKRIEEVLGH AFENGFPLRL
901: HSSL
Best Arabidopsis Sequence Match ( AT5G47040.1 )
(BLAST)
001: MAETVELPSR LAILPFRNKV LLPGAIIRIR CTSHSSVTLV EQELWQKEEK GLIGILPVRD DAEGSSIGTM INPGAGSDSG ERSLKFLVGT TDAQKSDAKD
101: QQDLQWHTRG VAARALHLSR GVEKPSGRVT YVVVLEGLSR FNVQELGKRG PYSVARITSL EMTKAELEQV KQDPDFVALS RQFKTTAMEL VSVLEQKQKT
201: GGRTKVLLET VPIHKLADIF VASFEMSFEE QLSMLDSVDL KVRLSKATEL VDRHLQSIRV AEKITQKVEG QLSKSQKEYL LRQQMRAIKE ELGDNDDDED
301: DVAALERKMQ AAGMPSNIWK HAQRELRRLK KMQPQQPGYN SSRVYLELLA DLPWDKASEE HELDLKAAKE RLDSDHYGLA KVKQRIIEYL AVRKLKPDAR
401: GPVLCFVGPP GVGKTSLASS IAAALGRKFV RLSLGGVKDE ADIRGHRRTY IGSMPGRLID GLKRVGVCNP VMLLDEIDKT GSDVRGDPAS ALLEVLDPEQ
501: NKSFNDHYLN VPYDLSKVVF VATANRVQPI PPPLLDRMEL IELPGYTQEE KLKIAMRHLI PRVLDQHGLS SEFLKIPEAM VKNIIQRYTR EAGVRSLERN
601: LAALARAAAV MVAEHEQSLP LSKDVQKLTS PLLNGRMAEG GEVEMEVIPM GVNDHEIGGT FQSPSALVVD ETMLEKILGP PRFDDSEAAD RVASAGVSVG
701: LVWTTFGGEV QFVEATSMVG KGEMHLTGQL GDVIKESAQL ALTWVRARAS DFKLALAGDM NVLDGRDIHI HFPAGAVPKD GPSAGVTLVT ALVSLFSQKR
801: VRADTAMTGE MTLRGLVLPV GGIKDKILAA HRYGIKRVIL PQRNSKDLVE VPAAVLSSLE VILAKRMEDV LENAFEGGCP WRNNYSKL
Arabidopsis Description
LON2Lon protease homolog 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O64948]
SUBAcon: [mitochondrion,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.