CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04278	Soybean	cytosol, mitochondrion, peroxisome, plastid	90.1	90.41
KRH57559	Soybean	cytosol, mitochondrion, peroxisome, plastid	89.99	90.4
VIT_02s0012g00310.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	86.61	86.71
PGSC0003DMT400004645	Potato	cytosol, mitochondrion, peroxisome, plastid	84.48	85.63
Solyc08g077440.2.1	Tomato	plastid	84.36	85.52
EER99247	Sorghum	plastid	81.55	81.92
AT5G47040.1	Thale cress	mitochondrion, peroxisome	81.55	81.64
CDX77732	Canola	mitochondrion, peroxisome	81.44	81.62
GSMUA_Achr1P07700_001	Banana	cytosol, mitochondrion, peroxisome, plastid	81.55	81.55
Bra024968.1-P	Field mustard	mitochondrion	81.33	81.51
CDY33510	Canola	mitochondrion, peroxisome	80.88	81.06
TraesCS5B01G322000.2	Wheat	cytosol	79.98	80.25
TraesCS5D01G328300.2	Wheat	plastid	79.86	80.14
TraesCS5A01G321500.1	Wheat	cytosol	79.86	80.14
GSMUA_Achr2P03430_001	Banana	mitochondrion	78.74	78.92
HORVU5Hr1G081930.2	Barley	cytosol, plastid	79.75	78.43
Os09t0533400-01	Rice	mitochondrion	25.98	77.52
Zm00001d021301_P002	Maize	peroxisome	81.66	75.08
Zm00001d006214_P002	Maize	plasma membrane	65.8	57.81
KRH55202	Soybean	cytosol	11.14	42.86
KRH33822	Soybean	mitochondrion	33.18	30.7
KRG90539	Soybean	mitochondrion	32.96	29.81

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	EntrezGene:100796650	MapMan:19.4.2.4	Gene3D:2.30.130.40	Gene3D:3.30.230.10
Gene3D:3.40.50.300	InterPro:AAA+_ATPase	EMBL:ACUP02000668	InterPro:ATPase_AAA_core	ncoils:Coil	EnsemblPlantsGene:GLYMA_01G203100
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777
GO:GO:0005782	GO:GO:0006508	GO:GO:0006515	GO:GO:0006625	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009056	GO:GO:0009987	GO:GO:0016043
GO:GO:0016485	GO:GO:0016558	GO:GO:0016787	GO:GO:0016887	GO:GO:0019538	GO:GO:0030163
UniProt:I1J9N9	InterPro:IPR003111	InterPro:IPR008269	InterPro:IPR014721	EnsemblPlants:KRH77266	ProteinID:KRH77266
ProteinID:KRH77266.1	ProteinID:KRH77267.1	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ	InterPro:Lon_proteolytic	InterPro:Lon_substr-bd
InterPro:Lonp2_euk	HAMAP:MF_03121	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02190	PFAM:PF05362
PIRSF:PIRSF001174	PRINTS:PR00830	ScanProsite:PS01046	PFscan:PS51786	PFscan:PS51787	PANTHER:PTHR10046
PANTHER:PTHR10046:SF24	InterPro:PUA-like_sf	InterPro:Peptidase_S16_AS	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	MEROPS:S16.003
SMART:SM00382	SMART:SM00464	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF88697	TIGRFAMs:TIGR00763
UniParc:UPI00023372F2	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:53582937..53602143

Molecular Weight (calculated)

98295.3 Da

IEP (calculated)

7.357

GRAVY (calculated)

-0.215

Length

889 amino acids

Sequence
(BLAST)

001: MAESFELPNR LAILPFRNKV LLPGAIIRIR CTSPISVKLV EQELWQREEK GLIGILPVRD AAAEIQPAGP VISHGKGTDS LDQNSKVQGG SSDSQKLDVK
101: NQHDVVHWHN RGVAARALHL SRGVEKPSGR VTYIVVLEGL CRFSVQELST RGTYHTARIS SLEMTKTEME QVEQDPDFIT LSRQFKATAM ELISVLEQKQ
201: KTGGRTKVLL ETVPVHKLAD IFVASFEISF EEQLSMLDSV DPKVRLSKAT ELVDRHLQSI LVAEKITQKV EGQLSKSQKE FLLRQQMRAI KEELGDNDDD
301: EDDLAALERK MQKAGMPQNI WKHAHKELRR LKKMQPQQPG YNSSRAYLDL LADLPWQKAS KELELDLRAA QERLDTDHYG LVKVKQRIIE YLAVRKLKPD
401: ARGPVLCFVG PPGVGKTSLA SSIAAALGRK FVRISLGGVK DEADIRGHRR TYIGSMPGRL IDGLKRVAVC NPVMLIDEID KTGSDVRGDP ASALLEVLDP
501: EQNKAFNDHY LNVPFDLSKV IFVATANRAQ PIPPPLLDRM EVIELPGYTA EEKLKIAMQH LIPRVLEQHG LSSEFLQIPE GMVQLVIQRY TREAGVRNLE
601: RNLAALARAA AVRVAEQEQV VPLNKGVEGL STPLLENRLS DGAEVEMEVI PMGVNNRDIS NTFRITSPLV VDEAMLEKVL GPPKFDGREA EDRVATPGAS
701: VGLVWTTFGG EVQFVEATAM VGKGELHLTG QLGDVIKESA QIALTWVRAR ATELRLAAAE GINLLEGRDI HIHFPAGAVP KDGPSAGVTL VTALVSLFSQ
801: RRVRSDTAMT GEMTLRGLVL PVGGIKDKIL AAHRCGIKRV ILPERNLKDL VEVPSSVLAD LEILLAKRME DVLEQAFDGG CPWRQHSKL

Best Arabidopsis Sequence Match ( AT5G47040.1 )
(BLAST)

001: MAETVELPSR LAILPFRNKV LLPGAIIRIR CTSHSSVTLV EQELWQKEEK GLIGILPVRD DAEGSSIGTM INPGAGSDSG ERSLKFLVGT TDAQKSDAKD
101: QQDLQWHTRG VAARALHLSR GVEKPSGRVT YVVVLEGLSR FNVQELGKRG PYSVARITSL EMTKAELEQV KQDPDFVALS RQFKTTAMEL VSVLEQKQKT
201: GGRTKVLLET VPIHKLADIF VASFEMSFEE QLSMLDSVDL KVRLSKATEL VDRHLQSIRV AEKITQKVEG QLSKSQKEYL LRQQMRAIKE ELGDNDDDED
301: DVAALERKMQ AAGMPSNIWK HAQRELRRLK KMQPQQPGYN SSRVYLELLA DLPWDKASEE HELDLKAAKE RLDSDHYGLA KVKQRIIEYL AVRKLKPDAR
401: GPVLCFVGPP GVGKTSLASS IAAALGRKFV RLSLGGVKDE ADIRGHRRTY IGSMPGRLID GLKRVGVCNP VMLLDEIDKT GSDVRGDPAS ALLEVLDPEQ
501: NKSFNDHYLN VPYDLSKVVF VATANRVQPI PPPLLDRMEL IELPGYTQEE KLKIAMRHLI PRVLDQHGLS SEFLKIPEAM VKNIIQRYTR EAGVRSLERN
601: LAALARAAAV MVAEHEQSLP LSKDVQKLTS PLLNGRMAEG GEVEMEVIPM GVNDHEIGGT FQSPSALVVD ETMLEKILGP PRFDDSEAAD RVASAGVSVG
701: LVWTTFGGEV QFVEATSMVG KGEMHLTGQL GDVIKESAQL ALTWVRARAS DFKLALAGDM NVLDGRDIHI HFPAGAVPKD GPSAGVTLVT ALVSLFSQKR
801: VRADTAMTGE MTLRGLVLPV GGIKDKILAA HRYGIKRVIL PQRNSKDLVE VPAAVLSSLE VILAKRMEDV LENAFEGGCP WRNNYSKL

Arabidopsis Description

LON2Lon protease homolog 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O64948]
SUBAcon: [mitochondrion,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.