Factsheet for GSMUA_Achr2P03430_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P07700_001	Banana	cytosol, mitochondrion, peroxisome, plastid	89.4	89.2
VIT_02s0012g00310.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	81.51	81.42
EER99247	Sorghum	plastid	80.83	81.02
TraesCS5B01G322000.2	Wheat	cytosol	80.16	80.25
TraesCS5D01G328300.2	Wheat	plastid	80.16	80.25
TraesCS5A01G321500.1	Wheat	cytosol	80.05	80.14
PGSC0003DMT400004645	Potato	cytosol, mitochondrion, peroxisome, plastid	78.58	79.48
Solyc08g077440.2.1	Tomato	plastid	78.35	79.25
KRH77266	Soybean	mitochondrion	78.92	78.74
HORVU5Hr1G081930.2	Barley	cytosol, plastid	79.71	78.21
Os09t0533400-01	Rice	mitochondrion	26.27	78.19
KRH57559	Soybean	cytosol, mitochondrion, peroxisome, plastid	77.34	77.51
KRH04278	Soybean	cytosol, mitochondrion, peroxisome, plastid	77.34	77.43
AT5G47040.1	Thale cress	mitochondrion, peroxisome	77.34	77.25
CDY33510	Canola	mitochondrion, peroxisome	77.23	77.23
CDX77732	Canola	mitochondrion, peroxisome	77.23	77.23
Bra024968.1-P	Field mustard	mitochondrion	77.11	77.11
Zm00001d021301_P002	Maize	peroxisome	80.16	73.53
Zm00001d006214_P002	Maize	plasma membrane	65.84	57.71
GSMUA_Achr1P16010_001	Banana	cytosol	3.49	36.47
GSMUA_Achr7P05610_001	Banana	mitochondrion	33.37	28.03

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	MapMan:19.4.2.4	Gene3D:3.30.230.10	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_core	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004176
GO:GO:0004252	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	GO:GO:0005782	GO:GO:0006508	GO:GO:0006515	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009056	GO:GO:0009987
GO:GO:0016043	GO:GO:0016485	GO:GO:0016558	GO:GO:0016787	GO:GO:0016887	GO:GO:0019538
GO:GO:0030163	EnsemblPlantsGene:GSMUA_Achr2G03430_001	EnsemblPlants:GSMUA_Achr2P03430_001	EnsemblPlants:GSMUA_Achr2T03430_001	InterPro:IPR003111	InterPro:IPR008269
InterPro:IPR014721	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ	InterPro:Lon_proteolytic	InterPro:Lon_substr-bd	InterPro:Lonp2_euk
UniProt:M0S4T4	HAMAP:MF_03121	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02190	PFAM:PF05362
PIRSF:PIRSF001174	PRINTS:PR00830	ScanProsite:PS01046	PFscan:PS51786	PFscan:PS51787	PANTHER:PTHR10046
PANTHER:PTHR10046:SF24	InterPro:PUA-like_sf	InterPro:Peptidase_S16_AS	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00382
SMART:SM00464	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF88697	TIGRFAMs:TIGR00763	UniParc:UPI000296D9EB
SEG:seg	:	:	:	:	:

Description

Lon protease homolog 2, peroxisomal [Source:GMGC_GENE;Acc:GSMUA_Achr2G03430_001]

Coordinates

chr2:-:9100574..9116911

Molecular Weight (calculated)

98090.1 Da

IEP (calculated)

6.405

GRAVY (calculated)

-0.173

Length

887 amino acids

Sequence
(BLAST)

001: MVELAELPSR LAILPFRNKV LLPGAIIRIR CTSPSSVKLV EQELWHKEEK GLIGVLPVRD TEAAAVGSMI APGMGSDSGE QSLKAKADVG EFQNQDANNE
101: QELMHWHHRG VAARALHLSR GVEKPSGRVT YIVVLEGLCR ISVQELSTRG TYYVARISRL DLTKSELEQA EQDPDLVLLS RQFKATAMEL ISVLEQKQKT
201: VGRTKVLLET VPVYRLADIF VASFEISFEE QLSMLDSIDL KVRLSKATEL VERHLQSIRV AEKITQKVEG QLSKSQKEFL LRLQMRAIKE ELGDNDDDED
301: DLATLERKMQ SAGMPPNIWK HAQRELRQLK KMQPQQPGYG SSHGYLEILV DLPWQKVSEE PELDLKAAKE SLDRDHYGLV KVKQRIIEYL AVRKLKPDVG
401: GPVLCFVGPP GVGKTSLASS IAAALNRKFV RISLGGVKDE ADIRGHRRTY IGSMPGRLID GLKRVAVSNP VMLLDEIDKT GSDVRGDPAS ALLEVLDPEQ
501: NKTFNDHYLN VPFDLSKVIF VATANRIQPI PPPLLDRMEV IELPGYTPDE KLNIAMKHLI PRVLDQHGLS SELLQIPEGM VTLIIQRYTR EAGVRNLERN
601: LATLARAAAV KVAEQDSTMQ LSKDVHPMTT SFLDTRVADG ADIETEVIPM SVSRQEISNS FTSALVMLVD DAMVEKVLGP PRFDDSETAD RLATPGVSVG
701: LVWTSFGGEV QFVEATAMMG KGDLHLTGQL GDVIKESAQI ALTWVRTRVA DLKLSATGEI NLLENQDIHI HFPAGAVPKD GPSAGVTLVT SLVSLFSQRK
801: VRADTAMTGE MTLRGLVLPV GGIKDKILAA HRYGIKRVIL PERNLKDLTE VPSAVLGGME MLLVKRIEDV LEQAFEGGFP WKQHSKL

Best Arabidopsis Sequence Match ( AT5G47040.1 )
(BLAST)

001: MAETVELPSR LAILPFRNKV LLPGAIIRIR CTSHSSVTLV EQELWQKEEK GLIGILPVRD DAEGSSIGTM INPGAGSDSG ERSLKFLVGT TDAQKSDAKD
101: QQDLQWHTRG VAARALHLSR GVEKPSGRVT YVVVLEGLSR FNVQELGKRG PYSVARITSL EMTKAELEQV KQDPDFVALS RQFKTTAMEL VSVLEQKQKT
201: GGRTKVLLET VPIHKLADIF VASFEMSFEE QLSMLDSVDL KVRLSKATEL VDRHLQSIRV AEKITQKVEG QLSKSQKEYL LRQQMRAIKE ELGDNDDDED
301: DVAALERKMQ AAGMPSNIWK HAQRELRRLK KMQPQQPGYN SSRVYLELLA DLPWDKASEE HELDLKAAKE RLDSDHYGLA KVKQRIIEYL AVRKLKPDAR
401: GPVLCFVGPP GVGKTSLASS IAAALGRKFV RLSLGGVKDE ADIRGHRRTY IGSMPGRLID GLKRVGVCNP VMLLDEIDKT GSDVRGDPAS ALLEVLDPEQ
501: NKSFNDHYLN VPYDLSKVVF VATANRVQPI PPPLLDRMEL IELPGYTQEE KLKIAMRHLI PRVLDQHGLS SEFLKIPEAM VKNIIQRYTR EAGVRSLERN
601: LAALARAAAV MVAEHEQSLP LSKDVQKLTS PLLNGRMAEG GEVEMEVIPM GVNDHEIGGT FQSPSALVVD ETMLEKILGP PRFDDSEAAD RVASAGVSVG
701: LVWTTFGGEV QFVEATSMVG KGEMHLTGQL GDVIKESAQL ALTWVRARAS DFKLALAGDM NVLDGRDIHI HFPAGAVPKD GPSAGVTLVT ALVSLFSQKR
801: VRADTAMTGE MTLRGLVLPV GGIKDKILAA HRYGIKRVIL PQRNSKDLVE VPAAVLSSLE VILAKRMEDV LENAFEGGCP WRNNYSKL

Arabidopsis Description

LON2Lon protease homolog 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O64948]
SUBAcon: [mitochondrion,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.