Factsheet for VIT_02s0012g00310.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 3
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g077440.2.1	Tomato	plastid	86.94	88.03
PGSC0003DMT400004645	Potato	cytosol, mitochondrion, peroxisome, plastid	86.82	87.91
KRH77266	Soybean	mitochondrion	86.71	86.61
KRH04278	Soybean	cytosol, mitochondrion, peroxisome, plastid	85.7	85.89
KRH57559	Soybean	cytosol, mitochondrion, peroxisome, plastid	85.47	85.76
AT5G47040.1	Thale cress	mitochondrion, peroxisome	85.02	85.02
CDX77732	Canola	mitochondrion, peroxisome	84.91	85.01
Bra024968.1-P	Field mustard	mitochondrion	84.8	84.89
CDY33510	Canola	mitochondrion, peroxisome	84.12	84.22
GSMUA_Achr1P07700_001	Banana	cytosol, mitochondrion, peroxisome, plastid	83.67	83.58
EER99247	Sorghum	plastid	82.66	82.94
TraesCS5B01G322000.2	Wheat	cytosol	81.42	81.6
TraesCS5D01G328300.2	Wheat	plastid	81.42	81.6
GSMUA_Achr2P03430_001	Banana	mitochondrion	81.42	81.51
TraesCS5A01G321500.1	Wheat	cytosol	81.31	81.49
HORVU5Hr1G081930.2	Barley	cytosol, plastid	81.42	79.98
Os09t0533400-01	Rice	mitochondrion	25.9	77.18
Zm00001d021301_P002	Maize	peroxisome	82.77	76.01
Zm00001d006214_P002	Maize	plasma membrane	67.45	59.19
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	34.57	31.39

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	EntrezGene:100262630	wikigene:100262630	MapMan:19.4.2.4	Gene3D:3.30.230.10
Gene3D:3.40.50.300	InterPro:AAA+_ATPase	EMBL:AM471349	InterPro:ATPase_AAA_core	ProteinID:CAN75012	ProteinID:CAN75012.1
ProteinID:CBI33970	ProteinID:CBI33970.3	ncoils:Coil	UniProt:D7TTJ0	EMBL:FN596247	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0005782
GO:GO:0006508	GO:GO:0006515	GO:GO:0006625	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009056	GO:GO:0009791	GO:GO:0009987
GO:GO:0016043	GO:GO:0016485	GO:GO:0016558	GO:GO:0016560	GO:GO:0016787	GO:GO:0016887
GO:GO:0019538	GO:GO:0030163	GO:GO:0043233	GO:GO:0048527	InterPro:IPR003111	InterPro:IPR008269
InterPro:IPR014721	EntrezGene:LOC100262630	wikigene:LOC100262630	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ	InterPro:Lon_proteolytic
InterPro:Lon_substr-bd	InterPro:Lonp2_euk	HAMAP:MF_03121	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02190
PFAM:PF05362	PIRSF:PIRSF001174	PRINTS:PR00830	ScanProsite:PS01046	PFscan:PS51786	PFscan:PS51787
PANTHER:PTHR10046	PANTHER:PTHR10046:SF24	InterPro:PUA-like_sf	InterPro:Peptidase_S16_AS	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr
MEROPS:S16.003	SMART:SM00382	SMART:SM00464	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF88697
TIGR:TC63578	TIGRFAMs:TIGR00763	UniParc:UPI0001982CB9	ArrayExpress:VIT_02s0012g00310	EnsemblPlantsGene:VIT_02s0012g00310	EnsemblPlants:VIT_02s0012g00310.t01
unigene:Vvi.16252	RefSeq:XP_002282657	RefSeq:XP_002282657.1	SEG:seg	:	:

Description

Lon protease homolog 2, peroxisomal [Source:UniProtKB/TrEMBL;Acc:D7TTJ0]

Coordinates

chr2:+:6092736..6111900

Molecular Weight (calculated)

98393.4 Da

IEP (calculated)

7.312

GRAVY (calculated)

-0.231

Length

888 amino acids

Sequence
(BLAST)

001: MAESVELPSR LAILPFRNKV LLPGAIIRIR CTSPSSVKLV EQELWQREEK GLIGILPVRD TAEMTTVGPL LSQGVGTDSG ERSSKIQVAT SESNKPDGKN
101: QQEVIHWHTR GVAARALHLS RGVEKPSGRV TYIVVLEGLC RFSVQELSTR GTYYTARISS LDMNKTEMEQ VEQDPEFIAL SRQFKATAME LISVLEQKQK
201: TGGRTKVLLE TVPVHKLADI FVASFEISFE EQLSMLDSVD LKVRLSKATE LVDRHLQSIR VAEKITQKVE GQLSKSQKEF LLRQQMRAIK EELGDNDDDE
301: DDVAALERKM QSAGMPPNIW KHAQRELRRL KKMQPQQPGY NSSRVYLELL ADLPWQKASE EHELDLRAAK ERLDSDHYGL VKVKQRIIEY LAVRKLKPDA
401: RGPVLCFVGP PGVGKTSLAS SIASALGRKF VRISLGGVKD EADIRGHRRT YIGSMPGRLI EGLKRVGVSN PVMLLDEIDK TGSDVRGDPA SALLEVLDPE
501: QNKTFNDHYL NVPYDLSKVI FVATANRVQP IPPPLLDRME VIELPGYTPE EKLKIAMRHL IPRVLDQHGL SSEFLEISEA MVKLVIQRYT REAGVRSLER
601: NLAALARAAA VQVAEQEQTI PLSKDMHRLA SPLLDSRLAD GSEMEMEVIP MGVNNQELSN TFRVASPLVV DEAMLDKVLG PPRYDDKETA ERVATAGVSV
701: GLVWTAFGGE VQFVEATAML GKGDLHLTGQ LGDVIKESAQ IALTWVRARA ADLKLAAAEE INLLQGRDVH IHFPAGAVPK DGPSAGVTMV TSLVSLFSQK
801: RVRADTAMTG EMTLRGLILP VGGIKDKILA AHRYGIKRVI LPERNLKDLV EVPSAVLASL EILLAKRMED VLEQAFEGGC PWRRDSKL

Best Arabidopsis Sequence Match ( AT5G47040.1 )
(BLAST)

001: MAETVELPSR LAILPFRNKV LLPGAIIRIR CTSHSSVTLV EQELWQKEEK GLIGILPVRD DAEGSSIGTM INPGAGSDSG ERSLKFLVGT TDAQKSDAKD
101: QQDLQWHTRG VAARALHLSR GVEKPSGRVT YVVVLEGLSR FNVQELGKRG PYSVARITSL EMTKAELEQV KQDPDFVALS RQFKTTAMEL VSVLEQKQKT
201: GGRTKVLLET VPIHKLADIF VASFEMSFEE QLSMLDSVDL KVRLSKATEL VDRHLQSIRV AEKITQKVEG QLSKSQKEYL LRQQMRAIKE ELGDNDDDED
301: DVAALERKMQ AAGMPSNIWK HAQRELRRLK KMQPQQPGYN SSRVYLELLA DLPWDKASEE HELDLKAAKE RLDSDHYGLA KVKQRIIEYL AVRKLKPDAR
401: GPVLCFVGPP GVGKTSLASS IAAALGRKFV RLSLGGVKDE ADIRGHRRTY IGSMPGRLID GLKRVGVCNP VMLLDEIDKT GSDVRGDPAS ALLEVLDPEQ
501: NKSFNDHYLN VPYDLSKVVF VATANRVQPI PPPLLDRMEL IELPGYTQEE KLKIAMRHLI PRVLDQHGLS SEFLKIPEAM VKNIIQRYTR EAGVRSLERN
601: LAALARAAAV MVAEHEQSLP LSKDVQKLTS PLLNGRMAEG GEVEMEVIPM GVNDHEIGGT FQSPSALVVD ETMLEKILGP PRFDDSEAAD RVASAGVSVG
701: LVWTTFGGEV QFVEATSMVG KGEMHLTGQL GDVIKESAQL ALTWVRARAS DFKLALAGDM NVLDGRDIHI HFPAGAVPKD GPSAGVTLVT ALVSLFSQKR
801: VRADTAMTGE MTLRGLVLPV GGIKDKILAA HRYGIKRVIL PQRNSKDLVE VPAAVLSSLE VILAKRMEDV LENAFEGGCP WRNNYSKL

Arabidopsis Description

LON2Lon protease homolog 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O64948]
SUBAcon: [mitochondrion,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.