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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 4
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:mitochondrion
iPSORT:plastid
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
 nucleus: 21132161
mitochondrion: 27780359
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH55202 Soybean cytosol 23.41 97.4
KRG90539 Soybean mitochondrion 93.86 91.76
HORVU1Hr1G055380.1 Barley cytosol 24.56 89.06
Zm00001d043949_P001 Maize cytosol, plastid 8.01 81.05
Solyc10g024310.1.1 Tomato mitochondrion, vacuole 9.47 77.78
Solyc10g024320.1.1 Tomato cytosol 47.35 76.99
VIT_14s0060g01230.t01 Wine grape mitochondrion, plastid 77.84 76.48
TraesCS2B01G110800.1 Wheat mitochondrion, plastid 73.36 71.87
HORVU2Hr1G016000.1 Barley plastid 73.15 71.66
TraesCS2D01G094000.1 Wheat mitochondrion, plastid 73.15 71.66
TraesCS2A01G095500.1 Wheat plastid 73.05 71.56
EER97776 Sorghum plastid 72.42 70.3
GSMUA_Achr1P16010_001 Banana cytosol 6.04 68.24
Os07t0689300-01 Rice mitochondrion 32.99 67.16
KXG39532 Sorghum mitochondrion 69.41 65.14
CDX87027 Canola mitochondrion 10.41 59.88
Os03t0306400-01 Rice plasma membrane 3.85 50.68
KRH77266 Soybean mitochondrion 30.7 33.18
KRH04278 Soybean cytosol, mitochondrion, peroxisome, plastid 30.39 32.96
KRH57559 Soybean cytosol, mitochondrion, peroxisome, plastid 30.28 32.88
Protein Annotations
Gene3D:1.10.8.60Gene3D:1.20.58.1480EntrezGene:100802878MapMan:19.4.2.4Gene3D:2.30.130.40Gene3D:3.30.230.10
Gene3D:3.40.50.300InterPro:AAA+_ATPaseEMBL:ACUP02006558InterPro:ATPase_AAA_corencoils:CoilEnsemblPlantsGene:GLYMA_10G147200
GO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003824GO:GO:0004176
GO:GO:0004252GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0005759GO:GO:0006139GO:GO:0006259GO:GO:0006508
GO:GO:0006515GO:GO:0006950GO:GO:0007005GO:GO:0008150GO:GO:0008152GO:GO:0008233
GO:GO:0008236GO:GO:0009056GO:GO:0009058GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0016887GO:GO:0019538GO:GO:0030163GO:GO:0034599GO:GO:0043565GO:GO:0051131
GO:GO:0070361GO:GO:0070407GO:GO:0090296UniProt:I1LB48InterPro:IPR003111InterPro:IPR008269
InterPro:IPR014721EnsemblPlants:KRH33822ProteinID:KRH33822ProteinID:KRH33822.1InterPro:Lon_PrtaseInterPro:Lon_bac/euk-typ
InterPro:Lon_proteolyticInterPro:Lon_substr-bdInterPro:Lonm_eukHAMAP:MF_03120InterPro:P-loop_NTPasePFAM:PF00004
PFAM:PF02190PFAM:PF05362PRINTS:PR00830PFscan:PS51786PFscan:PS51787PANTHER:PTHR43718
PANTHER:PTHR43718:SF2InterPro:PUA-like_sfInterPro:Ribosomal_S5_D2-typ_foldInterPro:Ribosomal_S5_D2-typ_fold_subgrSMART:SM00382SMART:SM00464
SUPFAM:SSF52540SUPFAM:SSF54211SUPFAM:SSF88697TIGRFAMs:TIGR00763UniParc:UPI000233CDA3SEG:seg
Description
hypothetical protein
Coordinates
chr10:+:38248742..38259884
Molecular Weight (calculated)
106862.0 Da
IEP (calculated)
5.730
GRAVY (calculated)
-0.304
Length
961 amino acids
Sequence
(BLAST)
001: MLKLIASSRI HRVHPTVLRP AHHSASPLLR VLSSLGGLSW RNANVGGRYF FCSDSSDGSD HVVDAGVQAA EESESKASAI VPTYPRPEDY LTVLALPLIH
101: RPLFPGFYMP VFVKDPKLLA ALQESRERQA PYAGAFLLKD EPEADPSVVS SSDADKNVYD LKGKELFNRL HEVGTLAQIS SIHGDQVILI GHRRLRITEM
201: VSEDPLTVKV DHLKDKTYNK DDDIIKATSF EVISTLRDVL KTSSLWRDHV QTYTKHIGDF TYPRLADFGA AISGANKLQC QQVLEELDVY KRLKLTLELV
301: KKEMEISKIQ ESIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGLETDDKTA LTGKFRERIE PKREKCPPHI LQVIDEELAK LQLLEASSSE FSVTRNYLDW
401: LTALPWGEYS DENFDVTRAQ KILDEDHYGL TDVKERILEF IAVGKLRGTS QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT
501: YIGAMPGKIV QCLKNVGTSN PLVLIDEIDK LGRGHAGDPA SALLELLDPE QNANFLDHYL DVTIDLSKVL FVCTANVVEM IPNPLLDRME VVAIAGYITD
601: EKMHIARDYL EKTTREACGI KPEQVEVTDA ALLALIENYC RESGVRNLQK HIEKIYRKIA LQLVRQGEMI DATMLPIKDK VDSDELGQNA VQNKNSELVE
701: GIDPEKESET SDEIHKVQSS DQSQCLEVAK ESGGDKEIET KTIEQVLVDE SNLTDFVGKP VFHAERIYDQ TPVGVVMGLA WTAMGGSTLY IETTFVEEGE
801: GKGTLHLTGQ LGDVMKESAQ IAHTVARRIL LEREPENPFF ANSKLHLHVP AGATPKDGPS AGSTMTTSLL SLAMKKPVKK DLAMTGEVTL TGKILPIGGV
901: KEKTIAARRS EVKTIIFPSA NRRDFDELAP NVKEGLDVHF VDDYMQIFNL AFDDEQSQNI K
Best Arabidopsis Sequence Match ( AT5G26860.1 )
(BLAST)
001: MKGFDTNLRL QASSPEFSNG FLPKRQNFIK LNRRNCYPRS SFSPTMLKLF TSSASRVHHL TPVSRVVGSS PVESPLFKAL SQITGWNRRS TSLGHRAFFC
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED
Arabidopsis Description
LON_ARA_ARAlon protease 1 [Source:TAIR;Acc:AT5G26860]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.