Factsheet for TraesCS2A01G095500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G055380.1	Barley	cytosol	26.91	99.62
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	98.78	98.78
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	98.78	98.78
HORVU2Hr1G016000.1	Barley	plastid	97.55	97.55
KRH55202	Soybean	cytosol	20.59	87.45
Zm00001d022560_P001	Maize	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	85.53	85.61
EER97776	Sorghum	plastid	85.63	84.85
Os07t0689300-01	Rice	mitochondrion	38.33	79.66
Zm00001d007202_P003	Maize	plasma membrane	81.86	78.42
Solyc10g024320.1.1	Tomato	cytosol	46.08	76.48
Bra009924.1-P	Field mustard	mitochondrion, plastid	71.05	75.19
CDY05546	Canola	plastid	70.64	74.92
CDY66499	Canola	plastid	70.03	74.51
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	72.99	73.21
KRH33822	Soybean	mitochondrion	71.56	73.05
CDX88248	Canola	cytosol	5.61	72.37
KRG90539	Soybean	mitochondrion	71.66	71.52
CDX80599	Canola	cytosol	5.61	71.43
CDX88247	Canola	plastid	51.89	70.69
Bra040521.1-P	Field mustard	cytosol	38.33	70.68
CDX80598	Canola	plastid	51.99	70.34
AT5G26860.1	Thale cress	cytosol, plastid	70.54	70.25
Solyc10g024310.1.1	Tomato	mitochondrion, vacuole	8.36	70.09
CDY22820	Canola	cytosol	5.81	68.67
CDY68112	Canola	cytosol	5.81	68.67
CDY25200	Canola	cytosol	5.71	67.47
GSMUA_Achr7P05610_001	Banana	mitochondrion	72.27	67.14
AT3G05790.1	Thale cress	plastid	64.42	67.09
GSMUA_Achr1P16010_001	Banana	cytosol	5.71	65.88
CDY18802	Canola	cytosol	32.93	65.25
Bra040254.1-P	Field mustard	plastid	59.33	65.03
CDY18823	Canola	plastid	60.35	64.91
Bra020562.1-P	Field mustard	cytosol	71.76	64.17
AT3G05780.1	Thale cress	mitochondrion, plastid	59.02	62.66
Bra018886.1-P	Field mustard	plastid	51.68	59.93
CDY22818	Canola	plastid	51.68	59.93
AT3G05775.1	Thale cress	cytosol, mitochondrion, peroxisome, plastid	7.95	58.21
Solyc10g024300.1.1	Tomato	cytosol	13.76	58.19
CDX87027	Canola	mitochondrion	9.89	58.08
CDY25198	Canola	cytosol, mitochondrion	25.48	56.95
Bra018887.1-P	Field mustard	mitochondrion	39.65	55.41
Bra018889.1-P	Field mustard	mitochondrion	53.31	54.25
CDX99569	Canola	plastid	13.46	54.1
CDY22821	Canola	mitochondrion	53.52	53.68
CDY22819	Canola	mitochondrion	36.6	52.95
CDY25199	Canola	mitochondrion	38.63	46.67
CDY33341	Canola	plastid	9.17	44.55
CDY66234	Canola	plastid	8.26	41.33
CDY18803	Canola	cytosol	6.01	41.26
Bra040522.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	11.93	41.05
CDY25202	Canola	cytosol	42.92	37.39
TraesCS5A01G321500.1	Wheat	cytosol	29.46	32.62
CDX80228	Canola	endoplasmic reticulum, extracellular, mitochondrion, nucleus	4.28	17.57

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	MapMan:19.4.2.4	Gene3D:2.30.130.40	Gene3D:3.30.230.10	Gene3D:3.40.50.300
InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004176	GO:GO:0004252	GO:GO:0005488	GO:GO:0005524	GO:GO:0006508	GO:GO:0006515
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0030163	InterPro:IPR003111	InterPro:IPR008269	InterPro:IPR014721	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ
InterPro:Lon_proteolytic	InterPro:Lon_substr-bd	InterPro:Lonm_euk	HAMAP:MF_03120	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF02190	PFAM:PF05362	PRINTS:PR00830	ScanProsite:PS01046	PFscan:PS51786	PFscan:PS51787
PANTHER:PTHR43718	PANTHER:PTHR43718:SF2	InterPro:PUA-like_sf	InterPro:Peptidase_S16_AS	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr
SMART:SM00382	SMART:SM00464	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF88697	TIGRFAMs:TIGR00763
EnsemblPlantsGene:TraesCS2A01G095500	EnsemblPlants:TraesCS2A01G095500.1	TIGR:cd00009	SEG:seg	:	:

Description

No Description!

Coordinates

chr2A:-:48867219..48876979

Molecular Weight (calculated)

107410.0 Da

IEP (calculated)

5.496

GRAVY (calculated)

-0.255

Length

981 amino acids

Sequence
(BLAST)

001: MLRAAAAAAA AFPARFAAVP AVPAAEEMRS PLLRVFGSLR GGRSSVMGRR ARFCSSSSGS DSEAAAAAAA EAKAEDAVAA EGEAEGKPSS AIVSTNPRPE
101: DFLSVIALPL PHRPLFPGFY MPIYVKDQKL LQALIENRKR SAPYAGAFLV KDEEGTDPSI VASPDSSDNK TIDSLKGKEL LKRLHEVGTL AQITSIQGDQ
201: VVLLGHRRLR ITEMVEEDPL TVKVDHLKEN TYNKDDDVIK ATSFEVISTL REVLKTSSLW KDHVQTYIQH VGDFNYPRLA DFGAAISGAN KLLCQEVLEE
301: LDVDKRLKLT LELVKKDMEI SKLQQAIAKA IEEKISGDQR RYLLNEQLKA IKKELGLETD DKTALSEKFR ERIEAKKDKC PPHVLQVIEE ELTKLQLLEA
401: SSSEFNVTRN YLDWLTVLPW GNYSNENFGV HHAQQILDED HYGLSDVKER ILEFIAVGKL RGTSQGKIIC LSGPPGVGKT SIGRSIARAL NRQFYRFSVG
501: GLADVAEIKG HRRTYVGAMP GKMVQCLKSV GTANPLVLID EIDKLGRGHS GDPASALLEL LDPEQNINFL DHYLDVPIDL SKVLFVCTAN VIDTIPNPLL
601: DRMEIISIAG YITDEKMHIA RDYLEKNTRE ACGIKPEQVE VTDAALLALI ENYCREAGVR NLQKQIEKIY RKIALQLVRQ GVSNEPALEA VIVTASVEPT
701: DDGSATIVKD EKLNDPAVKD PEEAKEPSLK ETLVTEPVLS TDTLSTPEGN KDTDGVKEEA ADKAVKKVLI NSSNLDDFVG KPVFHAERIY EQTPVGVVMG
801: LAWTSMGGST LYIETTKVEE GEGKGALVMT GQLGDVMKES AQIAHTVSRA ILRDREPDNQ FFANSKLHLH VPAGATPKDG PSAGCTMITS MLSLAMGKPA
901: RKDLAMTGEV TLTGRILPIG GVKEKAIAAR RSSIKTIIFP AANKRDFDEL AANVKEGLEV HFVDTYSEIY KIAFQNETET S

Best Arabidopsis Sequence Match ( AT5G26860.1 )
(BLAST)

001: MKGFDTNLRL QASSPEFSNG FLPKRQNFIK LNRRNCYPRS SFSPTMLKLF TSSASRVHHL TPVSRVVGSS PVESPLFKAL SQITGWNRRS TSLGHRAFFC
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED

Arabidopsis Description

LON_ARA_ARAlon protease 1 [Source:TAIR;Acc:AT5G26860]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.