Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33341 | Canola | plastid | 33.62 | 38.61 |
| CDY66234 | Canola | plastid | 32.33 | 38.27 |
| CDX99569 | Canola | plastid | 33.62 | 31.97 |
| EER97776 | Sorghum | plastid | 59.05 | 13.84 |
| HORVU2Hr1G016000.1 | Barley | plastid | 58.19 | 13.76 |
| TraesCS2A01G095500.1 | Wheat | plastid | 58.19 | 13.76 |
| TraesCS2B01G110800.1 | Wheat | mitochondrion, plastid | 58.19 | 13.76 |
| TraesCS2D01G094000.1 | Wheat | mitochondrion, plastid | 58.19 | 13.76 |
| KXG39532 | Sorghum | mitochondrion | 49.14 | 11.13 |
| Solyc08g077440.2.1 | Tomato | plastid | 14.22 | 3.76 |
| Solyc10g024310.1.1 | Tomato | mitochondrion, vacuole | 1.72 | 3.42 |
| Os07t0689300-01 | Rice | mitochondrion | 0.86 | 0.42 |
| Solyc10g024320.1.1 | Tomato | cytosol | 0.86 | 0.34 |
| HORVU1Hr1G055380.1 | Barley | cytosol | 0.0 | 0.0 |
| Os03t0306400-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Zm00001d043949_P001 | Maize | cytosol, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.30.130.40 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004176 |
| GO:GO:0004252 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005777 | GO:GO:0005782 | GO:GO:0006625 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016485 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0030163 | InterPro:IPR003111 | UniProt:K4CZ49 | InterPro:Lon_Prtase | InterPro:Lon_substr-bd |
| PFAM:PF02190 | PFscan:PS51787 | PANTHER:PTHR43718 | PANTHER:PTHR43718:SF2 | InterPro:PUA-like_sf | SMART:SM00464 |
| SUPFAM:SSF88697 | EnsemblPlantsGene:Solyc10g024300.1 | EnsemblPlants:Solyc10g024300.1.1 | UniParc:UPI000276ABA9 | : | : |
Description
No Description!
Coordinates
chr10:+:13335161..13340690
Molecular Weight (calculated)
26613.4 Da
IEP (calculated)
9.657
GRAVY (calculated)
-0.348
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MESKCPFISY FDSRVKHAQQ VWYLIFIKLS SPPSKVGRNC KLAYGAQFYC YRKSRELVMR KVLALPLPHR PLFPGVYMPI YVKDPKVLAA LVESRKRQAP
101: YAGAFLVKDE QGTDPNVVSA SDTEKNIYEL KGKDLFNRLH EVGTLAQITS IQGDQVILIG HRRIRMTEVV SEEPLTVKVD HLKEKPYNKD DDVIKATSFE
201: VLSTLRDVLK TSSLWKDHVQ TYIQRHCCDA PK
101: YAGAFLVKDE QGTDPNVVSA SDTEKNIYEL KGKDLFNRLH EVGTLAQITS IQGDQVILIG HRRIRMTEVV SEEPLTVKVD HLKEKPYNKD DDVIKATSFE
201: VLSTLRDVLK TSSLWKDHVQ TYIQRHCCDA PK
001: MKGFDTNLRL QASSPEFSNG FLPKRQNFIK LNRRNCYPRS SFSPTMLKLF TSSASRVHHL TPVSRVVGSS PVESPLFKAL SQITGWNRRS TSLGHRAFFC
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED
Arabidopsis Description
LON_ARA_ARAlon protease 1 [Source:TAIR;Acc:AT5G26860]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.