Factsheet for Zm00001d043949_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P16010_001	Banana	cytosol	28.42	31.76
Bra040522.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	56.84	18.95
Bra040521.1-P	Field mustard	cytosol	73.68	13.16
Zm00001d022560_P001	Maize	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	92.63	8.98
Zm00001d007202_P003	Maize	plasma membrane	92.63	8.59
AT3G05780.1	Thale cress	mitochondrion, plastid	80.0	8.23
Bra040254.1-P	Field mustard	plastid	76.84	8.16
Bra009924.1-P	Field mustard	mitochondrion, plastid	78.95	8.09
Bra018886.1-P	Field mustard	plastid	71.58	8.04
KRH33822	Soybean	mitochondrion	81.05	8.01
KRG90539	Soybean	mitochondrion	82.11	7.93
AT3G05790.1	Thale cress	plastid	77.89	7.86
AT5G26860.1	Thale cress	cytosol, plastid	81.05	7.82
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	80.0	7.77
Bra018889.1-P	Field mustard	mitochondrion	73.68	7.26
Bra020562.1-P	Field mustard	cytosol	81.05	7.02
Zm00001d028875_P001	Maize	cytosol	51.58	6.74
Zm00001d021301_P002	Maize	peroxisome	45.26	4.45
Zm00001d006214_P002	Maize	plasma membrane	46.32	4.35
Bra018887.1-P	Field mustard	mitochondrion	27.37	3.7
Zm00001d043893_P001	Maize	cytosol	3.16	3.37
Zm00001d028501_P001	Maize	cytosol	3.16	2.91
Solyc10g024300.1.1	Tomato	cytosol	0.0	0.0
KRH55202	Soybean	cytosol	0.0	0.0
CDY66234	Canola	plastid	0.0	0.0
CDY33341	Canola	plastid	0.0	0.0
CDX99569	Canola	plastid	0.0	0.0
AT3G05775.1	Thale cress	cytosol, mitochondrion, peroxisome, plastid	0.0	0.0

Protein Annotations

Gene3D:3.30.230.10	MapMan:35.1	UniProt:A0A1D6NGE9	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004176	GO:GO:0004252	GO:GO:0005488	GO:GO:0005524	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538
GO:GO:0030163	InterPro:IPR008269	InterPro:IPR014721	InterPro:Lon_Prtase	InterPro:Lon_proteolytic	ProteinID:ONM39509.1
PFAM:PF05362	PRINTS:PR00830	ScanProsite:PS01046	PFscan:PS51786	PANTHER:PTHR43718	InterPro:Peptidase_S16_AS
InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SUPFAM:SSF54211	UniParc:UPI0008458B85	EnsemblPlantsGene:Zm00001d043949	EnsemblPlants:Zm00001d043949_P001
EnsemblPlants:Zm00001d043949_T001	:	:	:	:	:

Description

Lon protease homolog 1 mitochondrial

Coordinates

chr3:-:214565074..214566081

Molecular Weight (calculated)

10054.5 Da

IEP (calculated)

10.495

GRAVY (calculated)

0.144

Length

95 amino acids

Sequence
(BLAST)

1: MSLAWTAMGS TPKDGPSAGC TMITSMLSLV MGKTVKKDLA MTGEVTLTGR ILPIGGVKEK TIAARRSAIK TLIFPAANKR DFDELASNVK DLIVN

Best Arabidopsis Sequence Match ( AT5G26860.1 )
(BLAST)

001: MKGFDTNLRL QASSPEFSNG FLPKRQNFIK LNRRNCYPRS SFSPTMLKLF TSSASRVHHL TPVSRVVGSS PVESPLFKAL SQITGWNRRS TSLGHRAFFC
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED

Arabidopsis Description

LON_ARA_ARAlon protease 1 [Source:TAIR;Acc:AT5G26860]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.