Factsheet for Bra018886.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22818	Canola	plastid	98.7	98.7
Zm00001d043949_P001	Maize	cytosol, plastid	8.04	71.58
Bra040521.1-P	Field mustard	cytosol	44.44	70.68
Bra018887.1-P	Field mustard	mitochondrion	57.8	69.66
Bra018889.1-P	Field mustard	mitochondrion	73.76	64.73
GSMUA_Achr1P16010_001	Banana	cytosol	6.38	63.53
AT3G05790.1	Thale cress	plastid	68.32	61.36
Bra009924.1-P	Field mustard	mitochondrion, plastid	66.43	60.63
Bra040254.1-P	Field mustard	plastid	63.24	59.78
Os07t0689300-01	Rice	mitochondrion	32.51	58.26
KRH55202	Soybean	cytosol	15.13	55.41
HORVU1Hr1G055380.1	Barley	cytosol	17.14	54.72
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	61.58	53.27
HORVU2Hr1G016000.1	Barley	plastid	60.17	51.89
TraesCS2A01G095500.1	Wheat	plastid	59.93	51.68
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	59.93	51.68
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	59.81	51.58
EER97776	Sorghum	plastid	59.57	50.91
Bra020562.1-P	Field mustard	cytosol	64.54	49.77
KXG39532	Sorghum	mitochondrion	57.56	47.56
Os03t0306400-01	Rice	plasma membrane	3.9	45.21
Bra040522.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	15.01	44.56
Bra024968.1-P	Field mustard	mitochondrion	29.08	27.73

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	MapMan:19.4.2.4	Gene3D:2.30.130.40	Gene3D:3.30.230.10	Gene3D:3.40.50.300
InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	EnsemblPlantsGene:Bra018886	EnsemblPlants:Bra018886.1	EnsemblPlants:Bra018886.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488	GO:GO:0005524
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009056
GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR003111	InterPro:IPR008269	InterPro:IPR014721
InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ	InterPro:Lon_proteolytic	InterPro:Lon_substr-bd	UniProt:M4DQU3	InterPro:P-loop_NTPase
PFAM:PF00004	PFAM:PF02190	PFAM:PF05362	PIRSF:PIRSF001174	PRINTS:PR00830	ScanProsite:PS01046
PFscan:PS51786	PFscan:PS51787	PANTHER:PTHR43718	PANTHER:PTHR43718:SF2	InterPro:PUA-like_sf	InterPro:Peptidase_S16_AS
InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00382	SMART:SM00464	SUPFAM:SSF52540	SUPFAM:SSF54211
SUPFAM:SSF88697	TIGRFAMs:TIGR00763	UniParc:UPI000253EA6F	SEG:seg	:	:

Description

AT3G05780 (E=2e-145) LON3 | LON3 (LON PROTEASE 3); ATP binding / ATP-dependent peptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase/ serine-type peptidase

Coordinates

chrA06:-:1428595..1433086

Molecular Weight (calculated)

94295.1 Da

IEP (calculated)

7.482

GRAVY (calculated)

-0.241

Length

846 amino acids

Sequence
(BLAST)

001: MLKPYTSHHM PLAIRVGSTP ANRSLLLLKA WSQQTRWNRS SHDLARRAFF STLTNSKPTV SCSAIVSSKP CLDDCLTVIA VPFRDGPLIP GFYMPLCVKD
101: PKVLAALQES KSGETPYAGA FLLKDDKDPS TGSSVIHQVG TLAQILSIQG EQVIVIGRER LQITEMVGKD PLTVKTHHLK DKPYDKDDEV IRSTYFEDNI
201: GNSNYRKLAE FLLQKRRRKL TDSGAGIFEA VDFNYQKLAD FGAGISDAKK HKIQEVLEEL DVHKRLNLTL ELVKKQVEMN KIQLFHASLF PVTHATATFK
301: KRIEPIKEKI PKHVLKVIEE QFAKIDRIIR NYGSTDDIFT YVDWLTALPW GKCSDDNFDV PRAEKILDED HYGLRDVKER ILEFIAVGTL TGNPQGKIIC
401: LSGPPGVGKT SIARSVARAL DRKFFRLAVG GLSDSSHIKG DRGVYIGATP GKMVQCLKEV GTENPLVLLD EIDKLGKKRS RDPEGALLEL LDPQQNSHFL
501: DYFLDVTIDL SKVLFVCTAN VTDMIPGPLL DRMEVITLAG YTTDEKMHIA RDYLVKIVSG KCGIKPEQVD VSDTALLSLI ENYCREAGVR NLQKQIEKIF
601: RKIALKLVRQ RAPAKTDLES SAEGSMEQST AVAEKFMINE SNLADYVGKP VFRGEKIYEQ TPVGVVMGLA WTSMGGSTLY IETTFVEEGE GKGGLHITGH
701: LGSVMKESAE IAHTVARRIM FDKDPNNLFF ANSKLHLHVP EGATPKDGPS AGCTMITSLL SLAMKKPVRK DLAMTGEVTL TGRILPIGGL KEKTMAARRS
801: QVKEIIFPEA NRIDFEHLEE SFKEGLDVHF VDEYEQIFEL AFGYEQ

Best Arabidopsis Sequence Match ( AT3G05780.1 )
(BLAST)

001: MMPKRFNTSG FDTTLRLPSY YGFLHLTQSL TLNSRVFYGA RHVTPPAIRI GSNPVQSLLL FRAPTQLTGW NRSSRDLLGR RVSFSDRSDG VDLLSSSPIL
101: STNPNLDDSL TVIALPLPHK PLIPGFYMPI HVKDPKVLAA LQESTRQQSP YVGAFLLKDC ASTDSSSRSE TEDNVVEKFK VKGKPKKKRR KELLNRIHQV
201: GTLAQISSIQ GEQVILVGRR RLIIEEMVSE DPLTVRVDHL KDKPYDKDNA VIKASYVEVI STLREVLKTN SLWRDQDIGD FSYQHLADFG AGISGANKHK
301: NQGVLTELDV HKRLELTLEL VKKQVEINKI KETDDGSSLS AKIRVRIDTK RDKIPKHVIK VMEEEFTKLE MLEENYSDFD LTYNYLHWLT VLPWGNFSYE
401: NFDVLRAKKI LDEDHYGLSD VKERILEFIA VGRLRGTSQG KIICLSGPPG VGKTSIGRSI ARALDRKFFR FSVGGLSDVA EIKGHCQTYV GAMPGKMVQC
501: LKSVGTANPL ILFDEIDKLG RCHTGDPASA LLEVMDPEQN AKFLDHFLNV TIDLSKVLFV CTANVIEMIP GPLLDRMEVI DLSGYVTDEK MHIARDYLVK
601: KTCRDCGIKP EHVDLSDAAL LSLIENYCRE AGVRNLQKQI EKIYRKVALE LVRQGAVSFD VTDTKDTKSL AKTDSEVKRM KVADIMKILE SATGDSTESK
701: TKQSGLVAKT FEKVMIDESN LADYVGKPVF QEEKIYEQTP VGVVMGLAWT SMGGSTLYIE TTFVEEGLGK GGLHITGQLG DVMKESAQIA HTVARRIMFE
801: KEPENLFFAN SKLHLHVPEG ATPKDGPSAG CTMITSFLSL AMKKLVRKDL AMTGEVTLTG RILPIGGVKE KTIAARRSQI KTIIFPEANR RDFEELAENM
901: KEGLDVHFVD EYEKIFDLAF NYDH

Arabidopsis Description

LON3Lon protease homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M9L8]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.