Factsheet for Bra018887.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22819	Canola	mitochondrion	86.75	89.82
HORVU1Hr1G055380.1	Barley	cytosol	22.36	59.25
KRH55202	Soybean	cytosol	19.23	58.44
Bra018886.1-P	Field mustard	plastid	69.66	57.8
Bra018889.1-P	Field mustard	mitochondrion	73.93	53.84
AT3G05790.1	Thale cress	plastid	61.82	46.07
Bra040521.1-P	Field mustard	cytosol	34.62	45.68
Bra009924.1-P	Field mustard	mitochondrion, plastid	59.83	45.31
Bra040254.1-P	Field mustard	plastid	56.7	44.47
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	58.12	41.72
HORVU2Hr1G016000.1	Barley	plastid	55.7	39.86
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	55.56	39.76
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	55.56	39.76
TraesCS2A01G095500.1	Wheat	plastid	55.41	39.65
EER97776	Sorghum	plastid	54.99	38.99
Bra020562.1-P	Field mustard	cytosol	59.69	38.2
KXG39532	Sorghum	mitochondrion	54.7	37.5
Os03t0306400-01	Rice	plasma membrane	3.7	35.62
Os07t0689300-01	Rice	mitochondrion	20.94	31.14
Zm00001d043949_P001	Maize	cytosol, plastid	3.7	27.37
Bra024968.1-P	Field mustard	mitochondrion	27.78	21.98
Bra040522.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	7.69	18.95
GSMUA_Achr1P16010_001	Banana	cytosol	0.71	5.88

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.4.2.4	Gene3D:2.30.130.40	Gene3D:3.30.230.10	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_core	EnsemblPlantsGene:Bra018887	EnsemblPlants:Bra018887.1	EnsemblPlants:Bra018887.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488	GO:GO:0005524	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163
InterPro:IPR003111	InterPro:IPR008269	InterPro:IPR014721	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ	InterPro:Lon_proteolytic
InterPro:Lon_substr-bd	UniProt:M4DQU4	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02190	PFAM:PF05362
PIRSF:PIRSF001174	PFscan:PS51787	PANTHER:PTHR43718	PANTHER:PTHR43718:SF2	InterPro:PUA-like_sf	InterPro:Ribosomal_S5_D2-typ_fold_subgr
SMART:SM00382	SMART:SM00464	SUPFAM:SSF52540	SUPFAM:SSF88697	UniParc:UPI000253EA6D	SEG:seg

Description

AT3G05790 (E=4e-206) LON4 | LON4 (LON PROTEASE 4); ATP binding / ATP-dependent peptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase/ serine-type peptidase

Coordinates

chrA06:-:1419577..1426889

Molecular Weight (calculated)

79063.6 Da

IEP (calculated)

8.539

GRAVY (calculated)

-0.302

Length

702 amino acids

Sequence
(BLAST)

001: MLKLFTSHHV TSRLRNRSSH KLARRAFLTT LTDSKPTDTV SAKPCIDDCQ TVVALPLLRK PLIPGFYMPL YVKDPKVLAA LQESKSGQAP YAGAFLLKDD
101: KYASTASSYY GFETVNILDK LKGKELLKKI YQVGTLAQIL SIQGKQVILV GRKRLQITEM VNRNPLTVKA QHIKDKPYDK DDEVIKATYI EVIGDSNYRK
201: LAEFLLQKRR RNFTGLRAGI FDATDFNYQK LADFGAGICG ANKHKIQEVL EELDIHKRLD LVKKLVEISK IRVFHASIFP VTHAAVEDKK EEYGSAEYVK
301: QNRLSDTFRK RIEPIKEKIP KHVLEVIEEE LANLDRKEYG FGSTDSIYSY LDWLTALPWG NCSDENFDVL RAEKILDEDH YGLHVVKERI LEFIAVANLT
401: GNPEGKIICL SGPPGVGKTS VARSVARALG RKFFRLAVGG LSDSSEIKGD RRVYIGATPG KMVQCLKEVG TENPLVLLDE IDKLGNSSRD PEGALLELLD
501: PEQNAHFLDY FLDVPIDLSK VLFVCTANNI DRLPGPLLDR MEVIELAGYT ADEKMHIARD YLVKIVQRKC GMKPEQVDVS DAALLSLIEN YCREAGVRNL
601: QKQIEKIFRK IALKLVRQQA SAKAAMVDLE SSETAAEGSI ELTNEYDKPR IELLKEKTMA ARRSQVKVII FPEANRRDFE GLEESVKEGL DVHFVNMSRS
701: SS

Best Arabidopsis Sequence Match ( AT3G05780.1 )
(BLAST)

001: MMPKRFNTSG FDTTLRLPSY YGFLHLTQSL TLNSRVFYGA RHVTPPAIRI GSNPVQSLLL FRAPTQLTGW NRSSRDLLGR RVSFSDRSDG VDLLSSSPIL
101: STNPNLDDSL TVIALPLPHK PLIPGFYMPI HVKDPKVLAA LQESTRQQSP YVGAFLLKDC ASTDSSSRSE TEDNVVEKFK VKGKPKKKRR KELLNRIHQV
201: GTLAQISSIQ GEQVILVGRR RLIIEEMVSE DPLTVRVDHL KDKPYDKDNA VIKASYVEVI STLREVLKTN SLWRDQDIGD FSYQHLADFG AGISGANKHK
301: NQGVLTELDV HKRLELTLEL VKKQVEINKI KETDDGSSLS AKIRVRIDTK RDKIPKHVIK VMEEEFTKLE MLEENYSDFD LTYNYLHWLT VLPWGNFSYE
401: NFDVLRAKKI LDEDHYGLSD VKERILEFIA VGRLRGTSQG KIICLSGPPG VGKTSIGRSI ARALDRKFFR FSVGGLSDVA EIKGHCQTYV GAMPGKMVQC
501: LKSVGTANPL ILFDEIDKLG RCHTGDPASA LLEVMDPEQN AKFLDHFLNV TIDLSKVLFV CTANVIEMIP GPLLDRMEVI DLSGYVTDEK MHIARDYLVK
601: KTCRDCGIKP EHVDLSDAAL LSLIENYCRE AGVRNLQKQI EKIYRKVALE LVRQGAVSFD VTDTKDTKSL AKTDSEVKRM KVADIMKILE SATGDSTESK
701: TKQSGLVAKT FEKVMIDESN LADYVGKPVF QEEKIYEQTP VGVVMGLAWT SMGGSTLYIE TTFVEEGLGK GGLHITGQLG DVMKESAQIA HTVARRIMFE
801: KEPENLFFAN SKLHLHVPEG ATPKDGPSAG CTMITSFLSL AMKKLVRKDL AMTGEVTLTG RILPIGGVKE KTIAARRSQI KTIIFPEANR RDFEELAENM
901: KEGLDVHFVD EYEKIFDLAF NYDH

Arabidopsis Description

LON3Lon protease homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M9L8]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.