Factsheet for Bra020562.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05546	Canola	plastid	81.13	96.22
CDY66499	Canola	plastid	77.03	91.65
HORVU1Hr1G055380.1	Barley	cytosol	21.97	90.94
KRH55202	Soybean	cytosol	18.5	87.88
Bra009924.1-P	Field mustard	mitochondrion, plastid	73.93	87.49
AT5G26860.1	Thale cress	cytosol, plastid	75.84	84.47
Zm00001d043949_P001	Maize	cytosol, plastid	7.02	81.05
Bra040521.1-P	Field mustard	cytosol	36.74	75.75
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	64.72	72.6
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	64.27	71.87
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	64.27	71.87
HORVU2Hr1G016000.1	Barley	plastid	64.17	71.76
TraesCS2A01G095500.1	Wheat	plastid	64.17	71.76
EER97776	Sorghum	plastid	63.9	70.81
Bra040254.1-P	Field mustard	plastid	57.06	69.94
GSMUA_Achr1P16010_001	Banana	cytosol	5.38	69.41
Os07t0689300-01	Rice	mitochondrion	28.99	67.37
Bra018886.1-P	Field mustard	plastid	49.77	64.54
KXG39532	Sorghum	mitochondrion	59.25	63.48
Bra018887.1-P	Field mustard	mitochondrion	38.2	59.69
Bra018889.1-P	Field mustard	mitochondrion	51.23	58.3
Bra040522.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	12.03	46.32
Os03t0306400-01	Rice	plasma membrane	3.01	45.21
Bra024968.1-P	Field mustard	mitochondrion	25.98	32.13

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	MapMan:19.4.2.4	Gene3D:2.30.130.40	Gene3D:3.30.230.10	Gene3D:3.40.50.300
InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	EnsemblPlantsGene:Bra020562	EnsemblPlants:Bra020562.1	EnsemblPlants:Bra020562.1-P	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0004176
GO:GO:0004252	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006139	GO:GO:0006259	GO:GO:0006508
GO:GO:0006515	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016887
GO:GO:0019538	GO:GO:0030163	GO:GO:0034599	GO:GO:0043565	GO:GO:0051131	GO:GO:0070407
GO:GO:0090296	InterPro:IPR003111	InterPro:IPR008269	InterPro:IPR014721	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ
InterPro:Lon_proteolytic	InterPro:Lon_substr-bd	InterPro:Lonm_euk	UniProt:M4DVL8	HAMAP:MF_03120	InterPro:P-loop_NTPase
PFAM:PF00004	PFAM:PF02190	PFAM:PF05362	PRINTS:PR00830	ScanProsite:PS01046	PFscan:PS51786
PFscan:PS51787	PANTHER:PTHR43718	PANTHER:PTHR43718:SF2	InterPro:PUA-like_sf	InterPro:Peptidase_S16_AS	InterPro:Ribosomal_S5_D2-typ_fold
InterPro:Ribosomal_S5_D2-typ_fold_subgr	SMART:SM00382	SMART:SM00464	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF88697
TIGRFAMs:TIGR00763	UniParc:UPI0002546C7F	SEG:seg	:	:	:

Description

AT5G26860 (E=0.0) LON_ARA_ARA, LON1 | LON1 (LON PROTEASE 1); ATP binding / ATP-dependent peptidase/ serine-type peptidase

Coordinates

chrA02:-:24561408..24568848

Molecular Weight (calculated)

121096.0 Da

IEP (calculated)

5.110

GRAVY (calculated)

-0.359

Length

1097 amino acids

Sequence
(BLAST)

0001: MENNQLSGQE AIFGGQYGST LQVVSGDSSE EHQKLVEFLV EEDDTSVTES EEEYEIANIE DEVETEGVNA IEANNENEKK DEFSIGMKFS SDETAHIAYC
0101: KYACNHGFNG FDTHLLRLQP PSPSSLSNGF LPQRQGVTNL KVPNFRPRSS PSSPPMLKLF SSSTASRAHH HLSPAIRPGA SPFFKALSHL TGLNRRSNSL
0201: GGRRVFFCSG NASDAAAAAA AEAEAKAAES DSDGSDAKSS SAIVPTNPRP EDCLTVLALP VAHRPLFPGF YMPIYVKDPK VLAALQESRR RQAPYAGAFL
0301: LKDDPSTDSS SSADVEKNIN ELKGKDLLKR LHEVGTLAQI SSIQGDQVIL VGHRRLRITE MVSEEPLTVK VDHLKDKPFD MDDDVIKATS FEVISTLRDV
0401: LKTSSLWRDH VQTYTQHIGE FTYPRLADFG AAICGANRHQ AQEVLEELDV HKRLRLTLEL MKKEREISKI QETIAKAIEE KISGEQRRYL LNEQLKAIKK
0501: ELGVETDDKS ALSEKFKERI DPNKEKIPAH VLQVIEEELT KLQLLEASSS EFNVTRNYLD WLTILPWGNY SDENFDVVRA QQILDEDHYG LSDVKERILE
0601: FIAVGRLRGT SQGKIICLSG PPGVGKTSIG RSIARALNRK FFRFSVGGLA DVAEIKGHRR TYVGAMPGKM VQCLKSVGTA NPLVLIDEID KLGRGHAGDP
0701: ASALLELLDP EQNANFLDHY LDVTIDLSKV LFVCTANVID MIPNPLLDRM EVISIAGYIT DEKVHIARDY LEKTARGDCG IKPEQVEVSD AALLSLIENY
0801: CREAGVRNLQ KQIEKIYRKI ALKLVREGVV PEEPAVAVDA EEAEIVTKLD VESTENHVVE ESPAPAAKEP KEEAQNEKKA VEKVMIDESN LADYVGKPVF
0901: HAEKIYEPTP VGVVMGLAWT SMGGSTLYIE TTVVEEGEGK GCLNVTGQLG DVMKESAQIA HTVARKIMLE KEPENQFFAN SKLHLHVPAG ATPKDGPSAG
1001: CTMITSLLSL AMKKPVQKDL AMTGEVTLTG RILPIGGVKE KTIAARRSQV KTIIFPEANR RDFDELAENV KEGLDVHFVD DYGKIFDLAF GYDKQQD

Best Arabidopsis Sequence Match ( AT5G26860.1 )
(BLAST)

001: MKGFDTNLRL QASSPEFSNG FLPKRQNFIK LNRRNCYPRS SFSPTMLKLF TSSASRVHHL TPVSRVVGSS PVESPLFKAL SQITGWNRRS TSLGHRAFFC
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED

Arabidopsis Description

LON_ARA_ARAlon protease 1 [Source:TAIR;Acc:AT5G26860]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.