CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G055380.1	Barley	cytosol	87.01	75.85
Os03t0306400-01	Rice	plasma membrane	10.39	32.88
CDY25198	Canola	cytosol, mitochondrion	55.41	29.16
CDX80598	Canola	plastid	88.31	28.14
CDX88247	Canola	plastid	86.15	27.64
KRH33822	Soybean	mitochondrion	97.4	23.41
KRG90539	Soybean	mitochondrion	98.27	23.09
Bra009924.1-P	Field mustard	mitochondrion, plastid	88.74	22.11
CDY66499	Canola	plastid	87.88	22.02
CDY05546	Canola	plastid	87.88	21.95
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	92.21	21.78
Bra040521.1-P	Field mustard	cytosol	48.48	21.05
AT5G26860.1	Thale cress	cytosol, plastid	88.31	20.71
EER97776	Sorghum	plastid	88.74	20.71
HORVU2Hr1G016000.1	Barley	plastid	87.88	20.69
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	87.88	20.69
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	87.88	20.69
TraesCS2A01G095500.1	Wheat	plastid	87.45	20.59
CDY22819	Canola	mitochondrion	58.44	19.91
Bra040254.1-P	Field mustard	plastid	76.62	19.78
AT3G05790.1	Thale cress	plastid	80.09	19.64
KXG39532	Sorghum	mitochondrion	86.58	19.53
CDY18823	Canola	plastid	76.62	19.41
Bra018887.1-P	Field mustard	mitochondrion	58.44	19.23
Bra020562.1-P	Field mustard	cytosol	87.88	18.5
CDY25199	Canola	mitochondrion	56.28	16.01
AT3G05780.1	Thale cress	mitochondrion, plastid	63.64	15.91
CDY22818	Canola	plastid	55.41	15.13
Bra018886.1-P	Field mustard	plastid	55.41	15.13
Bra018889.1-P	Field mustard	mitochondrion	58.44	14.0
CDY22821	Canola	mitochondrion	58.44	13.8
CDY25202	Canola	cytosol	58.44	11.99
CDY18802	Canola	cytosol	24.68	11.52
KRH77266	Soybean	mitochondrion	42.86	11.14
KRH57559	Soybean	cytosol, mitochondrion, peroxisome, plastid	41.13	10.73
KRH04278	Soybean	cytosol, mitochondrion, peroxisome, plastid	41.13	10.72
GSMUA_Achr1P16010_001	Banana	cytosol	0.87	2.35
Os07t0689300-01	Rice	mitochondrion	4.33	2.12
CDY18803	Canola	cytosol	1.3	2.1
Bra040522.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	1.3	1.05
CDY22820	Canola	cytosol	0.0	0.0
Zm00001d043949_P001	Maize	cytosol, plastid	0.0	0.0
CDX80599	Canola	cytosol	0.0	0.0
CDX88248	Canola	cytosol	0.0	0.0
CDY68112	Canola	cytosol	0.0	0.0
CDY25200	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.58.1480	MapMan:19.4.2.4	Gene3D:3.40.50.300	UniProt:A0A0R0JQZ2	EMBL:ACUP02003926	InterPro:ATPase_AAA_core
EnsemblPlantsGene:GLYMA_06G236800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252
GO:GO:0005488	GO:GO:0005524	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	EnsemblPlants:KRH55202	ProteinID:KRH55202	ProteinID:KRH55202.1
InterPro:Lon_Prtase	InterPro:P-loop_NTPase	PFAM:PF00004	PANTHER:PTHR43718	SUPFAM:SSF52540	UniParc:UPI0006EE128F

Description

hypothetical protein

Coordinates

chr6:+:38652246..38663859

Molecular Weight (calculated)

25980.5 Da

IEP (calculated)

8.456

GRAVY (calculated)

-0.358

Length

231 amino acids

Sequence
(BLAST)

001: MEISKIQESI AKAIEEKISG EQRRYLLNEQ LKAIKKELGL ETDDKTALTG KFRERIEPKR EKCPPHILQV IDEELAKLQL LEASSSEFSV TRNYLDWLTA
101: LPWGEYSDEN FDVTRAQKIL DEDHYGLTDV KERILEFIAV GKLRGTSQGK IICLSGPPGV GKTSIGRSIA RALNRKFFRF SVGGLADVAE IKGHRRTYIG
201: AMPGRMVQCL KNVGTANPLV LTDEIDKVIH L

Best Arabidopsis Sequence Match ( AT3G05780.1 )
(BLAST)

001: MMPKRFNTSG FDTTLRLPSY YGFLHLTQSL TLNSRVFYGA RHVTPPAIRI GSNPVQSLLL FRAPTQLTGW NRSSRDLLGR RVSFSDRSDG VDLLSSSPIL
101: STNPNLDDSL TVIALPLPHK PLIPGFYMPI HVKDPKVLAA LQESTRQQSP YVGAFLLKDC ASTDSSSRSE TEDNVVEKFK VKGKPKKKRR KELLNRIHQV
201: GTLAQISSIQ GEQVILVGRR RLIIEEMVSE DPLTVRVDHL KDKPYDKDNA VIKASYVEVI STLREVLKTN SLWRDQDIGD FSYQHLADFG AGISGANKHK
301: NQGVLTELDV HKRLELTLEL VKKQVEINKI KETDDGSSLS AKIRVRIDTK RDKIPKHVIK VMEEEFTKLE MLEENYSDFD LTYNYLHWLT VLPWGNFSYE
401: NFDVLRAKKI LDEDHYGLSD VKERILEFIA VGRLRGTSQG KIICLSGPPG VGKTSIGRSI ARALDRKFFR FSVGGLSDVA EIKGHCQTYV GAMPGKMVQC
501: LKSVGTANPL ILFDEIDKLG RCHTGDPASA LLEVMDPEQN AKFLDHFLNV TIDLSKVLFV CTANVIEMIP GPLLDRMEVI DLSGYVTDEK MHIARDYLVK
601: KTCRDCGIKP EHVDLSDAAL LSLIENYCRE AGVRNLQKQI EKIYRKVALE LVRQGAVSFD VTDTKDTKSL AKTDSEVKRM KVADIMKILE SATGDSTESK
701: TKQSGLVAKT FEKVMIDESN LADYVGKPVF QEEKIYEQTP VGVVMGLAWT SMGGSTLYIE TTFVEEGLGK GGLHITGQLG DVMKESAQIA HTVARRIMFE
801: KEPENLFFAN SKLHLHVPEG ATPKDGPSAG CTMITSFLSL AMKKLVRKDL AMTGEVTLTG RILPIGGVKE KTIAARRSQI KTIIFPEANR RDFEELAENM
901: KEGLDVHFVD EYEKIFDLAF NYDH

Arabidopsis Description

LON3Lon protease homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M9L8]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.