CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68112	Canola	cytosol	14.14	84.34
CDY22820	Canola	cytosol	14.14	84.34
CDY25200	Canola	cytosol	13.94	83.13
CDX88248	Canola	cytosol	12.53	81.58
Bra040521.1-P	Field mustard	cytosol	87.47	81.39
CDX80599	Canola	cytosol	12.53	80.52
Os07t0689300-01	Rice	mitochondrion	54.55	57.2
CDX87027	Canola	mitochondrion	18.38	54.49
CDY25198	Canola	cytosol, mitochondrion	37.98	42.82
CDY18803	Canola	cytosol	12.32	42.66
CDY22818	Canola	plastid	66.06	38.65
CDY18823	Canola	plastid	70.3	38.16
CDY05546	Canola	plastid	69.49	37.19
CDY66499	Canola	plastid	69.09	37.09
AT3G05790.1	Thale cress	plastid	69.7	36.62
Os03t0306400-01	Rice	plasma membrane	5.25	35.62
CDY22821	Canola	mitochondrion	67.27	34.05
HORVU2Hr1G016000.1	Barley	plastid	65.86	33.23
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	65.86	33.23
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	65.66	33.13
TraesCS2A01G095500.1	Wheat	plastid	65.25	32.93
EER97776	Sorghum	plastid	65.45	32.73
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	63.43	32.11
HORVU1Hr1G055380.1	Barley	cytosol	16.77	31.32
KXG39532	Sorghum	mitochondrion	63.03	30.47
CDY25202	Canola	cytosol	66.26	29.13
KRH55202	Soybean	cytosol	11.52	24.68
CDY22819	Canola	mitochondrion	32.93	24.04
CDX88247	Canola	plastid	34.95	24.03
CDX80598	Canola	plastid	34.95	23.86
CDY25199	Canola	mitochondrion	34.95	21.31
CDX77732	Canola	mitochondrion, peroxisome	35.56	19.84
CDY33510	Canola	mitochondrion, peroxisome	35.35	19.73
CDX80228	Canola	endoplasmic reticulum, extracellular, mitochondrion, nucleus	5.05	10.46
CDY66234	Canola	plastid	0.0	0.0
CDY33341	Canola	plastid	0.0	0.0
CDX99569	Canola	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.4.2.4	Gene3D:3.30.230.10	Gene3D:3.40.50.300	GO:A0A078G1D0	UniProt:A0A078G1D0
EnsemblPlants:CDY18802	ProteinID:CDY18802	ProteinID:CDY18802.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004176	GO:GO:0004252	GO:GO:0005488	GO:GO:0005524	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538
GO:GO:0030163	EnsemblPlantsGene:GSBRNA2T00005968001	InterPro:IPR008269	InterPro:IPR014721	InterPro:Lon_Prtase	InterPro:Lon_proteolytic
InterPro:P-loop_NTPase	PFAM:PF05362	PRINTS:PR00830	ScanProsite:PS01046	PFscan:PS51786	PANTHER:PTHR43718
InterPro:Peptidase_S16_AS	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SUPFAM:SSF52540	SUPFAM:SSF54211	UniParc:UPI0004EDBC6E

Description

BnaAnng02670DBnaAnng02670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1D0]

Coordinates

chrLK032089:+:265341..267470

Molecular Weight (calculated)

55739.5 Da

IEP (calculated)

6.445

GRAVY (calculated)

-0.205

Length

495 amino acids

Sequence
(BLAST)

001: MLESSSSCVE STYDYLDWLT MLPWGNFSDE NFDIQKAEKI LDNDHYGLSH VKERILEFIA VRRLKGTSKG LINLKKICNI FLRSKQMFHS TVPWNRQYAN
101: INNKCILFLW QLGKSSSDDP GSALLELLDP EQNADFRDLY LDVTIDLSKV LFVCTANVLD KIPTPLLDRM EVINISGYIT DDKMHIARDH LLKTTCMECG
201: IKPEQVVVRD AALRSLIENY CREPGVRNLQ KHIEKIYRKI ALKLVREGAS AETPEVSVKN FIIDESNLAD YVGKPVLYAD KIYEQTPVGV VMGLSTKSTG
301: GSTLYIETTS VEEGEGKGGL HITGQLGDVM KESAEIAHTV ARRIMLEKEP KNLFFANSKL HLHIPEGATP KDGPSAGCTM ITSFLSLAMK KPVRKDLAMT
401: GEVTLTGRIL PIGGVKEKTI AARRSQVKMM IFPEGNRRDF DELACNLKEG LDVHFVDEYE QIFELAFGYN MGSPPLNFRR SLTSFMWDLL SGCFQ

Best Arabidopsis Sequence Match ( AT3G05780.1 )
(BLAST)

001: MMPKRFNTSG FDTTLRLPSY YGFLHLTQSL TLNSRVFYGA RHVTPPAIRI GSNPVQSLLL FRAPTQLTGW NRSSRDLLGR RVSFSDRSDG VDLLSSSPIL
101: STNPNLDDSL TVIALPLPHK PLIPGFYMPI HVKDPKVLAA LQESTRQQSP YVGAFLLKDC ASTDSSSRSE TEDNVVEKFK VKGKPKKKRR KELLNRIHQV
201: GTLAQISSIQ GEQVILVGRR RLIIEEMVSE DPLTVRVDHL KDKPYDKDNA VIKASYVEVI STLREVLKTN SLWRDQDIGD FSYQHLADFG AGISGANKHK
301: NQGVLTELDV HKRLELTLEL VKKQVEINKI KETDDGSSLS AKIRVRIDTK RDKIPKHVIK VMEEEFTKLE MLEENYSDFD LTYNYLHWLT VLPWGNFSYE
401: NFDVLRAKKI LDEDHYGLSD VKERILEFIA VGRLRGTSQG KIICLSGPPG VGKTSIGRSI ARALDRKFFR FSVGGLSDVA EIKGHCQTYV GAMPGKMVQC
501: LKSVGTANPL ILFDEIDKLG RCHTGDPASA LLEVMDPEQN AKFLDHFLNV TIDLSKVLFV CTANVIEMIP GPLLDRMEVI DLSGYVTDEK MHIARDYLVK
601: KTCRDCGIKP EHVDLSDAAL LSLIENYCRE AGVRNLQKQI EKIYRKVALE LVRQGAVSFD VTDTKDTKSL AKTDSEVKRM KVADIMKILE SATGDSTESK
701: TKQSGLVAKT FEKVMIDESN LADYVGKPVF QEEKIYEQTP VGVVMGLAWT SMGGSTLYIE TTFVEEGLGK GGLHITGQLG DVMKESAQIA HTVARRIMFE
801: KEPENLFFAN SKLHLHVPEG ATPKDGPSAG CTMITSFLSL AMKKLVRKDL AMTGEVTLTG RILPIGGVKE KTIAARRSQI KTIIFPEANR RDFEELAENM
901: KEGLDVHFVD EYEKIFDLAF NYDH

Arabidopsis Description

LON3Lon protease homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M9L8]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.