CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88248	Canola	cytosol	34.97	65.79
CDX80599	Canola	cytosol	34.97	64.94
CDY68112	Canola	cytosol	36.36	62.65
CDY22820	Canola	cytosol	36.36	62.65
CDY25200	Canola	cytosol	35.66	61.45
Bra040522.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	97.2	48.77
CDY25198	Canola	cytosol, mitochondrion	41.96	13.67
CDY18802	Canola	cytosol	42.66	12.32
Os07t0689300-01	Rice	mitochondrion	35.66	10.81
CDY22818	Canola	plastid	45.45	7.68
CDY18823	Canola	plastid	47.55	7.46
CDY66499	Canola	plastid	46.15	7.16
CDY05546	Canola	plastid	46.15	7.14
AT3G05790.1	Thale cress	plastid	46.15	7.01
CDY22821	Canola	mitochondrion	45.45	6.65
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	44.76	6.54
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	41.96	6.12
HORVU2Hr1G016000.1	Barley	plastid	41.96	6.12
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	41.26	6.01
TraesCS2A01G095500.1	Wheat	plastid	41.26	6.01
EER97776	Sorghum	plastid	41.26	5.96
KXG39532	Sorghum	mitochondrion	42.66	5.96
CDY25202	Canola	cytosol	43.36	5.51
CDX77732	Canola	mitochondrion, peroxisome	29.37	4.74
CDY33510	Canola	mitochondrion, peroxisome	29.37	4.74
CDY22819	Canola	mitochondrion	16.08	3.39
CDX80228	Canola	endoplasmic reticulum, extracellular, mitochondrion, nucleus	5.59	3.35
HORVU1Hr1G055380.1	Barley	cytosol	5.59	3.02
CDX87027	Canola	mitochondrion	3.5	2.99
CDY25199	Canola	mitochondrion	16.78	2.96
Os03t0306400-01	Rice	plasma membrane	1.4	2.74
CDX88247	Canola	plastid	11.19	2.22
CDX80598	Canola	plastid	11.19	2.21
CDY33341	Canola	plastid	2.8	1.98
CDX99569	Canola	plastid	2.8	1.64
KRH55202	Soybean	cytosol	2.1	1.3
CDY66234	Canola	plastid	1.4	1.02

Protein Annotations

Gene3D:3.30.230.10	MapMan:35.1	GO:A0A078G2B7	UniProt:A0A078G2B7	EnsemblPlants:CDY18803	ProteinID:CDY18803
ProteinID:CDY18803.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252
GO:GO:0005488	GO:GO:0005524	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	EnsemblPlantsGene:GSBRNA2T00005969001	InterPro:IPR008269	InterPro:IPR014721
InterPro:Lon_Prtase	InterPro:Lon_proteolytic	PFAM:PF05362	PRINTS:PR00830	PFscan:PS51786	PANTHER:PTHR43718
InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SUPFAM:SSF54211	UniParc:UPI0004EEA6C9	:	:

Description

BnaAnng02680DBnaAnng02680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2B7]

Coordinates

chrLK032089:-:268434..269546

Molecular Weight (calculated)

16228.4 Da

IEP (calculated)

4.699

GRAVY (calculated)

-0.219

Length

143 amino acids

Sequence
(BLAST)

001: MDAELESFPA VHPSLQYPLT IVIRVAGKKV YLEVPSVVFD AKPLAISDSE FLKYFKDSKV HFINAQGQID NLAMSGEITP TGEILQIGHV KDKTMGARRS
101: QLKTIIYPEA NRREFDELPE NLKDGLDVHF VDEYEQIFEL AFN

Best Arabidopsis Sequence Match ( AT3G05780.1 )
(BLAST)

001: MMPKRFNTSG FDTTLRLPSY YGFLHLTQSL TLNSRVFYGA RHVTPPAIRI GSNPVQSLLL FRAPTQLTGW NRSSRDLLGR RVSFSDRSDG VDLLSSSPIL
101: STNPNLDDSL TVIALPLPHK PLIPGFYMPI HVKDPKVLAA LQESTRQQSP YVGAFLLKDC ASTDSSSRSE TEDNVVEKFK VKGKPKKKRR KELLNRIHQV
201: GTLAQISSIQ GEQVILVGRR RLIIEEMVSE DPLTVRVDHL KDKPYDKDNA VIKASYVEVI STLREVLKTN SLWRDQDIGD FSYQHLADFG AGISGANKHK
301: NQGVLTELDV HKRLELTLEL VKKQVEINKI KETDDGSSLS AKIRVRIDTK RDKIPKHVIK VMEEEFTKLE MLEENYSDFD LTYNYLHWLT VLPWGNFSYE
401: NFDVLRAKKI LDEDHYGLSD VKERILEFIA VGRLRGTSQG KIICLSGPPG VGKTSIGRSI ARALDRKFFR FSVGGLSDVA EIKGHCQTYV GAMPGKMVQC
501: LKSVGTANPL ILFDEIDKLG RCHTGDPASA LLEVMDPEQN AKFLDHFLNV TIDLSKVLFV CTANVIEMIP GPLLDRMEVI DLSGYVTDEK MHIARDYLVK
601: KTCRDCGIKP EHVDLSDAAL LSLIENYCRE AGVRNLQKQI EKIYRKVALE LVRQGAVSFD VTDTKDTKSL AKTDSEVKRM KVADIMKILE SATGDSTESK
701: TKQSGLVAKT FEKVMIDESN LADYVGKPVF QEEKIYEQTP VGVVMGLAWT SMGGSTLYIE TTFVEEGLGK GGLHITGQLG DVMKESAQIA HTVARRIMFE
801: KEPENLFFAN SKLHLHVPEG ATPKDGPSAG CTMITSFLSL AMKKLVRKDL AMTGEVTLTG RILPIGGVKE KTIAARRSQI KTIIFPEANR RDFEELAENM
901: KEGLDVHFVD EYEKIFDLAF NYDH

Arabidopsis Description

LON3Lon protease homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M9L8]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.