CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0689300-01	Rice	mitochondrion	56.89	20.13
CDY18802	Canola	cytosol	54.49	18.38
Solyc10g024320.1.1	Tomato	cytosol	58.68	16.58
CDY05546	Canola	plastid	68.26	12.32
CDY66499	Canola	plastid	67.07	12.15
CDY22818	Canola	plastid	55.69	10.99
CDY25198	Canola	cytosol, mitochondrion	28.14	10.71
KRG90539	Soybean	mitochondrion	62.28	10.58
CDY18823	Canola	plastid	57.48	10.53
KRH33822	Soybean	mitochondrion	59.88	10.41
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	58.68	9.99
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	58.68	9.99
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	58.08	9.92
EER97776	Sorghum	plastid	58.68	9.9
TraesCS2A01G095500.1	Wheat	plastid	58.08	9.89
HORVU2Hr1G016000.1	Barley	plastid	58.08	9.89
HORVU1Hr1G055380.1	Barley	cytosol	15.57	9.81
CDY22821	Canola	mitochondrion	56.89	9.71
KXG39532	Sorghum	mitochondrion	56.89	9.28
CDY25202	Canola	cytosol	53.89	7.99
CDY33510	Canola	mitochondrion, peroxisome	34.73	6.54
CDX77732	Canola	mitochondrion, peroxisome	34.73	6.54
Os03t0306400-01	Rice	plasma membrane	2.4	5.48
CDX88247	Canola	plastid	19.16	4.44
CDX80598	Canola	plastid	19.16	4.41
CDX80228	Canola	endoplasmic reticulum, extracellular, mitochondrion, nucleus	5.99	4.18
CDY25199	Canola	mitochondrion	18.56	3.82
CDY22819	Canola	mitochondrion	14.97	3.69
CDY18803	Canola	cytosol	2.99	3.5
CDY33341	Canola	plastid	1.2	0.99
Solyc10g024310.1.1	Tomato	mitochondrion, vacuole	0.6	0.85
CDX99569	Canola	plastid	0.6	0.41
CDY68112	Canola	cytosol	0.0	0.0
CDY66234	Canola	plastid	0.0	0.0
CDY25200	Canola	cytosol	0.0	0.0
CDY22820	Canola	cytosol	0.0	0.0
CDX88248	Canola	cytosol	0.0	0.0
CDX80599	Canola	cytosol	0.0	0.0

Protein Annotations

MapMan:19.4.2.4	Gene3D:3.30.230.10	GO:A0A078DDB5	EnsemblPlants:CDX87027	ProteinID:CDX87027	ProteinID:CDX87027.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488
GO:GO:0005524	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787
GO:GO:0019538	GO:GO:0030163	EnsemblPlantsGene:GSBRNA2T00145907001	InterPro:IPR008269	InterPro:IPR014721	InterPro:Lon_Prtase
InterPro:Lon_proteolytic	PFAM:PF05362	ScanProsite:PS01046	PFscan:PS51786	PANTHER:PTHR43718	InterPro:Peptidase_S16_AS
InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SUPFAM:SSF54211	UniParc:UPI0004EF2363	:	:

Description

BnaC09g03420D

Coordinates

chrLK031849:-:65952..66691

Molecular Weight (calculated)

18437.2 Da

IEP (calculated)

9.210

GRAVY (calculated)

-0.344

Length

167 amino acids

Sequence
(BLAST)

001: MCGNFCNKLS QKISTQYLPR FSTKYSTTKF LGRSHASDPA SALLELLDPE QNANFLDTIL LTWKNKGRCS NKKIAVEKVM NDESNIAEYV AKPVFRAEKI
101: YEPTPGHLGD VMKESTQIAH TVARKILLEK EPANLFFANS KLHLHVPAGA TPKDGPSAGC TMITSLP

Best Arabidopsis Sequence Match ( AT5G26860.1 )
(BLAST)

001: MKGFDTNLRL QASSPEFSNG FLPKRQNFIK LNRRNCYPRS SFSPTMLKLF TSSASRVHHL TPVSRVVGSS PVESPLFKAL SQITGWNRRS TSLGHRAFFC
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED

Arabidopsis Description

LON_ARA_ARAlon protease 1 [Source:TAIR;Acc:AT5G26860]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.