Factsheet for Solyc10g024320.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G055380.1	Barley	cytosol	31.13	69.43
GSMUA_Achr1P16010_001	Banana	cytosol	9.81	68.24
Os07t0689300-01	Rice	mitochondrion	54.48	68.22
CDX87027	Canola	mitochondrion	16.58	58.68
KRH33822	Soybean	mitochondrion	76.99	47.35
KRG90539	Soybean	mitochondrion	77.83	46.8
Os03t0306400-01	Rice	plasma membrane	5.75	46.58
EER97776	Sorghum	plastid	77.83	46.46
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	76.82	46.42
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	76.99	46.38
TraesCS2A01G095500.1	Wheat	plastid	76.48	46.08
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	76.48	46.08
HORVU2Hr1G016000.1	Barley	plastid	76.31	45.97
KXG39532	Sorghum	mitochondrion	75.63	43.65
Solyc08g077440.2.1	Tomato	plastid	39.26	26.45
Solyc10g024300.1.1	Tomato	cytosol	0.34	0.86
Solyc10g024310.1.1	Tomato	mitochondrion, vacuole	0.0	0.0

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.4.2.4	Gene3D:3.30.230.10	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005759	GO:GO:0006508	GO:GO:0006515	GO:GO:0007005	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0008236	GO:GO:0009056	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0019538	GO:GO:0030163	InterPro:IPR008269	InterPro:IPR014721	UniProt:K4CZ51	InterPro:Lon_Prtase
InterPro:Lon_bac/euk-typ	InterPro:Lon_proteolytic	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF05362	PRINTS:PR00830
ScanProsite:PS01046	PFscan:PS51786	PANTHER:PTHR43718	InterPro:Peptidase_S16_AS	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr
MEROPS:S16.A03	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF54211	EnsemblPlantsGene:Solyc10g024320.1	EnsemblPlants:Solyc10g024320.1.1
TIGRFAMs:TIGR00763	UniParc:UPI000276ABAB	:	:	:	:

Description

No Description!

Coordinates

chr10:+:13346958..13373648

Molecular Weight (calculated)

65176.2 Da

IEP (calculated)

5.012

GRAVY (calculated)

-0.228

Length

591 amino acids

Sequence
(BLAST)

001: MQVIEEELTK LQLLEASSSE FNVTRNYLDW LTALPWGSYS DENFDVLRAE TILDEDHYGL SDVKERILEF IAVGKLRGTS QGKIICLSGP PGVGKTSIGR
101: SIARALNRKF YRFSVGGLSD VAEIKGHRRT YIGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SAMLELLDPE QNANFLDHYL DVPIDLSKVL
201: FVCTANVLEM IPNPLLDRME VITIAGYITD EKLHIARDYL EKSTRETCGI KPEQVEVTDA ALLALIENYC REAGVRNLQK QIEKIYRKIA LKLVRKDGKI
301: EPQNAGVDEV KAEHVHISDE IKFKEETQAG AKSVEGSHDD KPSEYVAEAL EAPVNQMQKS TDEDTHLQEV EEVTESEASK IIEKVVVDSS NLADYVGKPI
401: FHGERIYDQT PVGVVMGLAW TSMGGSTLYI ETSLVEQGEG KGLLNVTGQL GDVMKESAQI AHTVARIILL EKEPDNHFFA NSKLHLHVPA GSTPKDGPSA
501: GCTMITSLLS LAMKKPVKPY LAMTGEVTLT GKILPIGGVK EKSIAARRSD VKTIIFPSAN RRDFDELAPN VKEGLDVHFV DEYKQIYDLA F

Best Arabidopsis Sequence Match ( AT5G26860.1 )
(BLAST)

001: MKGFDTNLRL QASSPEFSNG FLPKRQNFIK LNRRNCYPRS SFSPTMLKLF TSSASRVHHL TPVSRVVGSS PVESPLFKAL SQITGWNRRS TSLGHRAFFC
101: SEPTNGEAAA EAETKAVESD SEVSDSKSSS AIVPTNPRPE DCLTVLALPV PHRPLFPGFY MPIYVKDPKV LAALQESRRR QAPYAGAFLL KDDPSADSSS
201: STDAEKNINE LKGKELLNRL HEVGTLAQIS SIQGDQVILV GHRRLRIKEM VSEEPLTVKV DHLKDNPFDM DDDVVKATSF EVISTLRDVL KTSSLWRDHV
301: QTYTQHIGDF TYPRLADFGA AICGANRHQA QEVLEELDVH KRLRLTLELM KKEMEISKIQ ETIAKAIEEK ISGEQRRYLL NEQLKAIKKE LGVETDDKSA
401: LSAKFKERIE PNKEKIPAHV LQVIEEELTK LQLLEASSSE FNVTRNYLDW LTILPWGNYS NENFDVARAQ TILDEDHYGL SDVKERILEF IAVGRLRGTS
501: QGKIICLSGP PGVGKTSIGR SIARALNRKF FRFSVGGLAD VAEIKGHRRT YVGAMPGKMV QCLKSVGTAN PLVLIDEIDK LGRGHAGDPA SALLELLDPE
601: QNANFLDHYL DVTIDLSKVL FVCTANVIDM IPNPLLDRME VISIAGYITD EKVHIARDYL EKTARGDCGV KPEQVEVSDA ALLSLIENYC REAGVRNLQK
701: QIEKIYRKIA LKLVREGAVP EEPAVASDPE EAEIVADVGE SIENHTVEEN TVSSAEEPKE EAQTEKIAIE TVMIDESNLA DYVGKPVFHA EKLYEQTPVG
801: VVMGLAWTSM GGSTLYIETT VVEEGEGKGG LNITGQLGDV MKESAQIAHT VARKIMLEKE PENQFFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAT
901: KKPVRKDLAM TGEVTLTGRI LPIGGVKEKT IAARRSQIKT IIFPEANRRD FDELAENVKE GLNVHFVDDY GKIFELAFGY DKQED

Arabidopsis Description

LON_ARA_ARAlon protease 1 [Source:TAIR;Acc:AT5G26860]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.