Factsheet for AT3G05790.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68112	Canola	cytosol	7.75	87.95
CDY22820	Canola	cytosol	7.75	87.95
CDY25200	Canola	cytosol	7.64	86.75
HORVU1Hr1G055380.1	Barley	cytosol	23.25	82.64
KRH55202	Soybean	cytosol	19.64	80.09
Zm00001d043949_P001	Maize	cytosol, plastid	7.86	77.89
Bra040521.1-P	Field mustard	cytosol	42.57	75.38
AT3G05780.1	Thale cress	mitochondrion, plastid	69.75	71.1
AT5G26860.1	Thale cress	cytosol, plastid	74.2	70.96
Bra040254.1-P	Field mustard	plastid	67.41	70.95
CDY18823	Canola	plastid	68.47	70.72
CDY18802	Canola	cytosol	36.62	69.7
CDY22818	Canola	plastid	61.47	68.44
Bra018886.1-P	Field mustard	plastid	61.36	68.32
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	69.11	66.56
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	67.41	64.73
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	67.3	64.63
HORVU2Hr1G016000.1	Barley	plastid	67.09	64.42
TraesCS2A01G095500.1	Wheat	plastid	67.09	64.42
EER97776	Sorghum	plastid	67.09	63.84
CDY25198	Canola	cytosol, mitochondrion	29.72	63.78
Os07t0689300-01	Rice	mitochondrion	31.63	63.14
Bra018887.1-P	Field mustard	mitochondrion	46.07	61.82
Bra018889.1-P	Field mustard	mitochondrion	63.06	61.62
CDY22821	Canola	mitochondrion	63.27	60.94
CDY22819	Canola	mitochondrion	42.99	59.73
AT3G05775.1	Thale cress	cytosol, mitochondrion, peroxisome, plastid	8.39	58.96
KXG39532	Sorghum	mitochondrion	63.69	58.59
CDY25199	Canola	mitochondrion	44.9	52.09
Os03t0306400-01	Rice	plasma membrane	3.72	47.95
CDY18803	Canola	cytosol	7.01	46.15
Bra040522.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	13.59	44.91
CDY25202	Canola	cytosol	48.73	40.76
AT5G47040.1	Thale cress	mitochondrion, peroxisome	30.25	32.09

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	MapMan:19.4.2.4	Gene3D:2.30.130.40	Gene3D:3.30.230.10	Gene3D:3.40.50.300
EntrezGene:819748	InterPro:AAA+_ATPase	ProteinID:AAF26081.1	ProteinID:AEE74297.1	ArrayExpress:AT3G05790	EnsemblPlantsGene:AT3G05790
RefSeq:AT3G05790	TAIR:AT3G05790	RefSeq:AT3G05790-TAIR-G	EnsemblPlants:AT3G05790.1	TAIR:AT3G05790.1	InterPro:ATPase_AAA_core
Unigene:At.53196	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003824	GO:GO:0004176	GO:GO:0004252	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006508
GO:GO:0006515	GO:GO:0007005	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0009056	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009987
GO:GO:0016020	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR003111
InterPro:IPR008269	InterPro:IPR014721	Symbol:LON4	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ	InterPro:Lon_proteolytic
InterPro:Lon_substr-bd	InterPro:Lonm_euk	HAMAP:MF_03120	RefSeq:NP_566259.1	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF02190	PFAM:PF05362	PIRSF:PIRSF001174	PO:PO:0000037	PO:PO:0000293	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616	PO:PO:0009009
PO:PO:0009010	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0025022
PRINTS:PR00830	ScanProsite:PS01046	PFscan:PS51786	PFscan:PS51787	PANTHER:PTHR43718	PANTHER:PTHR43718:SF2
InterPro:PUA-like_sf	InterPro:Peptidase_S16_AS	UniProt:Q9M9L7	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	MEROPS:S16.A02
SMART:SM00382	SMART:SM00464	SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF88697	TIGRFAMs:TIGR00763
UniParc:UPI000009FC35	SEG:seg	:	:	:	:

Description

LON4Lon protease homolog 4, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M9L7]

Coordinates

chr3:-:1720154..1725182

Molecular Weight (calculated)

104931.0 Da

IEP (calculated)

6.064

GRAVY (calculated)

-0.323

Length

942 amino acids

Sequence
(BLAST)

001: MLKFLTPTAY ASHHVTPATR FRSTPVKNLL FKQLTLLTGW NRSSYELGRR SFSSDLDSDT KSSTTTVSAK PHLDDCLTVI ALPLPHKPLI PGFYMPIYVK
101: DPKVLAALQE SRRQQAPYAG AFLLKDDASS DSSSSSETEN ILEKLKGKEL INRIHEVGTL AQISSIQGEQ VILIGHRQLR ITEMVSESED PLTVKVDHLK
201: DKPYDKDDDV IKATYFQVMS TLRDVLKTTS LWRDHVRTYT QACSLHIWHC LRHIGEFNYP KLADFGAGIS GANKHQNQGV LEELDVHKRL ELTLELVKKE
301: VEINKIQESI AKAVEEKFSG DRRRIILKEQ INAIKKELGG ETDSKSALSE KFRGRIDPIK DKIPGHVLKV IEEELKKLQL LETSSSEFDV TCNYLDWLTV
401: LPWGNFSDEN FNVLRAEKIL DEDHYGLSDV KERILEFIAV GGLRGTSQGK IICLSGPTGV GKTSIGRSIA RALDRKFFRF SVGGLSDVAE IKGHRRTYIG
501: AMPGKMVQCL KNVGTENPLV LIDEIDKLGV RGHHGDPASA MLELLDPEQN ANFLDHYLDV PIDLSKVLFV CTANVTDTIP GPLLDRMEVI TLSGYITDEK
601: MHIARDYLEK TARRDCGIKP EQVDVSDAAF LSLIEHYCRE AGVRNLQKQI EKIFRKIALK LVRKAASTEV PRISDDVTTD TEETKSLAKT DLESPETSAE
701: GSTVLTDELA TGDPTESTTE QSGEVAETVE KYMIDESNLS DYVGKPVFQE EKIYEQTPVG VVMGLAWTSM GGSTLYIETT FVEEGEGKGG LHITGRLGDV
801: MKESAEIAHT VARRIMLEKE PENKLFANSK LHLHVPAGAT PKDGPSAGCT MITSLLSLAL KKPVRKDLAM TGEVTLTGRI LAIGGVKEKT IAARRSQVKV
901: IIFPEANRRD FDELARNVKE GLEVHFVDEY EQIFELAFGY DH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.