Factsheet for AT3G05780.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80599	Canola	cytosol	7.14	85.71
Zm00001d043949_P001	Maize	cytosol, plastid	8.23	80.0
AT3G05790.1	Thale cress	plastid	71.1	69.75
HORVU1Hr1G055380.1	Barley	cytosol	19.37	67.55
AT5G26860.1	Thale cress	cytosol, plastid	68.51	64.26
KRH55202	Soybean	cytosol	15.91	63.64
Os07t0689300-01	Rice	mitochondrion	31.71	62.08
VIT_14s0060g01230.t01	Wine grape	mitochondrion, plastid	63.96	60.43
TraesCS2B01G110800.1	Wheat	mitochondrion, plastid	62.99	59.33
TraesCS2D01G094000.1	Wheat	mitochondrion, plastid	62.99	59.33
HORVU2Hr1G016000.1	Barley	plastid	62.77	59.12
TraesCS2A01G095500.1	Wheat	plastid	62.66	59.02
EER97776	Sorghum	plastid	62.99	58.79
AT3G05775.1	Thale cress	cytosol, mitochondrion, peroxisome, plastid	8.44	58.21
KXG39532	Sorghum	mitochondrion	59.31	53.52
Os03t0306400-01	Rice	plasma membrane	3.57	45.21
AT5G47040.1	Thale cress	mitochondrion, peroxisome	29.11	30.29

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.1480	MapMan:19.4.2.4	Gene3D:2.30.130.40	Gene3D:3.30.230.10	Gene3D:3.40.50.300
EntrezGene:819747	InterPro:AAA+_ATPase	ProteinID:AAF26080.1	ProteinID:AEE74296.1	ArrayExpress:AT3G05780	EnsemblPlantsGene:AT3G05780
RefSeq:AT3G05780	TAIR:AT3G05780	RefSeq:AT3G05780-TAIR-G	EnsemblPlants:AT3G05780.1	TAIR:AT3G05780.1	InterPro:ATPase_AAA_core
Unigene:At.53195	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824
GO:GO:0004176	GO:GO:0004252	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006508	GO:GO:0006515
GO:GO:0007005	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009056
GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR003111
InterPro:IPR008269	InterPro:IPR014721	Symbol:LON3	InterPro:Lon_Prtase	InterPro:Lon_bac/euk-typ	InterPro:Lon_proteolytic
InterPro:Lon_substr-bd	InterPro:Lonm_euk	HAMAP:MF_03120	RefSeq:NP_566258.1	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF02190	PFAM:PF05362	PIRSF:PIRSF001174	PO:PO:0000084	PRINTS:PR00830	ScanProsite:PS01046
PFscan:PS51786	PFscan:PS51787	PANTHER:PTHR43718	PANTHER:PTHR43718:SF2	InterPro:PUA-like_sf	InterPro:Peptidase_S16_AS
UniProt:Q9M9L8	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	MEROPS:S16.A03	SMART:SM00382	SMART:SM00464
SUPFAM:SSF52540	SUPFAM:SSF54211	SUPFAM:SSF88697	TIGRFAMs:TIGR00763	UniParc:UPI00000A5F74	SEG:seg

Description

LON3Lon protease homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M9L8]

Coordinates

chr3:-:1714941..1719608

Molecular Weight (calculated)

103482.0 Da

IEP (calculated)

7.820

GRAVY (calculated)

-0.271

Length

924 amino acids

Sequence
(BLAST)

001: MMPKRFNTSG FDTTLRLPSY YGFLHLTQSL TLNSRVFYGA RHVTPPAIRI GSNPVQSLLL FRAPTQLTGW NRSSRDLLGR RVSFSDRSDG VDLLSSSPIL
101: STNPNLDDSL TVIALPLPHK PLIPGFYMPI HVKDPKVLAA LQESTRQQSP YVGAFLLKDC ASTDSSSRSE TEDNVVEKFK VKGKPKKKRR KELLNRIHQV
201: GTLAQISSIQ GEQVILVGRR RLIIEEMVSE DPLTVRVDHL KDKPYDKDNA VIKASYVEVI STLREVLKTN SLWRDQDIGD FSYQHLADFG AGISGANKHK
301: NQGVLTELDV HKRLELTLEL VKKQVEINKI KETDDGSSLS AKIRVRIDTK RDKIPKHVIK VMEEEFTKLE MLEENYSDFD LTYNYLHWLT VLPWGNFSYE
401: NFDVLRAKKI LDEDHYGLSD VKERILEFIA VGRLRGTSQG KIICLSGPPG VGKTSIGRSI ARALDRKFFR FSVGGLSDVA EIKGHCQTYV GAMPGKMVQC
501: LKSVGTANPL ILFDEIDKLG RCHTGDPASA LLEVMDPEQN AKFLDHFLNV TIDLSKVLFV CTANVIEMIP GPLLDRMEVI DLSGYVTDEK MHIARDYLVK
601: KTCRDCGIKP EHVDLSDAAL LSLIENYCRE AGVRNLQKQI EKIYRKVALE LVRQGAVSFD VTDTKDTKSL AKTDSEVKRM KVADIMKILE SATGDSTESK
701: TKQSGLVAKT FEKVMIDESN LADYVGKPVF QEEKIYEQTP VGVVMGLAWT SMGGSTLYIE TTFVEEGLGK GGLHITGQLG DVMKESAQIA HTVARRIMFE
801: KEPENLFFAN SKLHLHVPEG ATPKDGPSAG CTMITSFLSL AMKKLVRKDL AMTGEVTLTG RILPIGGVKE KTIAARRSQI KTIIFPEANR RDFEELAENM
901: KEGLDVHFVD EYEKIFDLAF NYDH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.