Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G032230.1 | Barley | endoplasmic reticulum, extracellular, golgi | 16.34 | 93.33 |
| HORVU5Hr1G032220.1 | Barley | endoplasmic reticulum | 36.58 | 93.07 |
| ATMG00370.1 | Thale cress | plasma membrane | 67.7 | 87.44 |
| AT2G07739.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 67.32 | 86.93 |
| KRH75850 | Soybean | extracellular | 26.85 | 82.14 |
| Solyc11g039900.1.1 | Tomato | endoplasmic reticulum, extracellular | 31.52 | 75.0 |
| CDX71646 | Canola | endoplasmic reticulum | 97.28 | 73.1 |
| CDY19665 | Canola | endoplasmic reticulum | 97.28 | 73.1 |
| CDY54623 | Canola | endoplasmic reticulum | 97.28 | 73.1 |
| CDY63593 | Canola | endoplasmic reticulum | 97.28 | 73.1 |
| ATCG01000.1 | Thale cress | endoplasmic reticulum | 97.28 | 72.89 |
| Solyc02g078310.1.1 | Tomato | extracellular | 13.23 | 65.38 |
| CDX95223 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 97.28 | 21.97 |
| CDY19657 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 97.28 | 21.97 |
| ATCG01130.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 97.28 | 14.0 |
Protein Annotations
| MapMan:35.1 | ProteinID:AIZ06247.1 | ProteinID:AKD00227.1 | ProteinID:BAC98916.1 | ProteinID:CBX48343.1 | EnsemblPlants:CDY45490 |
| ProteinID:CDY45490 | ProteinID:CDY45490.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0009536 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00082137001 | PFAM:PF05758 |
| PANTHER:PTHR33163 | PANTHER:PTHR33163:SF13 | GO:Q6YSM2 | UniProt:Q6YSM2 | InterPro:TIC214 | TMHMM:TMhelix |
| UniParc:UPI00001D6C77 | SEG:seg | : | : | : | : |
Description
BnaCnng12490DBnaCnng12490D protein [Source:UniProtKB/TrEMBL;Acc:Q6YSM2]
Coordinates
chrLK032627:-:32981..33754
Molecular Weight (calculated)
29768.3 Da
IEP (calculated)
10.419
GRAVY (calculated)
0.485
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFQSFILGN LVSLCMKIIN SVVVVGLYYG FLTTFSIGPS YLFLLRARVM DEGEEGTEKK VSATTGFIAG QLMMFISIYY APLHLALGRP HTITVLALPY
101: LLFHFFWNNH KHFFDYGSTT RNEMRNLRIQ CVFLNNFIFQ LFNHFILPSS MLARLVNIYM FRCNNKMLFV TSSFVGWLIG HILFMKWVGL VLVWIQQNNS
201: IRSNVLIRSN KYKFLVSELR NSMARIFSIL LFITCVYYLG RIPSPILTKK LKGEGKS
101: LLFHFFWNNH KHFFDYGSTT RNEMRNLRIQ CVFLNNFIFQ LFNHFILPSS MLARLVNIYM FRCNNKMLFV TSSFVGWLIG HILFMKWVGL VLVWIQQNNS
201: IRSNVLIRSN KYKFLVSELR NSMARIFSIL LFITCVYYLG RIPSPILTKK LKGEGKS
001: MVFQSFILGN LVYLCMKIIN SVVVVGLYYG FLTTFSIGPS YLFLLRARVM DEGEEGTEKK VSATTGFIAG QLMMFISIYY APLHLALGRP HTITVLALPY
101: LLFHFFFWNN HKHFFDYGST TRNEMRNLRI QCVFPNNLIF KLFNHLILPS SMLARLVNIY MFRCNNKMLF VTSSFVVCVR MLLVEWAFPL FQLFLVMKV
101: LLFHFFFWNN HKHFFDYGST TRNEMRNLRI QCVFPNNLIF KLFNHLILPS SMLARLVNIY MFRCNNKMLF VTSSFVVCVR MLLVEWAFPL FQLFLVMKV
Arabidopsis Description
ORF199Uncharacterized mitochondrial protein AtMg00370 [Source:UniProtKB/Swiss-Prot;Acc:P93296]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.