CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09801	Canola	plastid	99.19	97.11
GSMUA_Achr1P19560_001	Banana	cytosol	6.72	96.15
CDX91117	Canola	plastid	97.31	95.01
CDX70507	Canola	plastid	95.97	94.69
CDX78525	Canola	plastid	95.7	94.43
GSMUA_Achr8P25670_001	Banana	cytosol, mitochondrion, plastid	63.98	89.14
AT5G13490.1	Thale cress	cytosol, mitochondrion, plastid	86.83	83.9
Solyc01g087070.2.1	Tomato	unclear	77.96	83.81
KRH20834	Soybean	mitochondrion	80.11	80.76
GSMUA_Achr9P19840_001	Banana	mitochondrion	24.46	80.53
GSMUA_Achr3P11040_001	Banana	mitochondrion	77.96	79.45
VIT_06s0004g01910.t01	Wine grape	cytosol, mitochondrion, plastid	82.8	78.37
PGSC0003DMT400017550	Potato	cytosol, mitochondrion, plastid	79.03	77.78
KRH13934	Soybean	mitochondrion	81.18	77.64
KRH43521	Soybean	cytosol, mitochondrion, plastid	80.91	77.58
VIT_19s0177g00370.t01	Wine grape	cytosol, mitochondrion	29.57	77.46
TraesCS6D01G262700.1	Wheat	golgi, nucleus, unclear	77.15	75.53
Os02t0718900-01	Rice	mitochondrion	77.42	75.39
TraesCS6A01G282200.1	Wheat	plastid	76.88	75.26
HORVU6Hr1G070780.1	Barley	plastid	76.61	75.0
GSMUA_Achr3P11890_001	Banana	cytosol, mitochondrion, plastid	78.23	74.42
KXG30875	Sorghum	plastid	77.15	74.16
Zm00001d051685_P002	Maize	plastid	77.15	74.16
Zm00001d017857_P002	Maize	plastid	77.42	74.04
TraesCS6B01G310600.1	Wheat	plastid	77.42	73.66
CDY14242	Canola	plastid	74.46	73.47
CDX97439	Canola	plastid	74.19	73.21
GSMUA_Achr10P...	Banana	unclear	79.84	65.85
VIT_13s0064g01050.t01	Wine grape	cytosol	81.72	63.73
GSMUA_Achr9P02190_001	Banana	golgi, mitochondrion, plastid	24.46	62.33
CDY02706	Canola	cytosol, mitochondrion, plastid	47.85	57.98
CDX85456	Canola	cytosol, mitochondrion, plastid	46.77	56.68
GSMUA_Achr1P19540_001	Banana	extracellular	13.71	55.43
CDY01045	Canola	golgi, mitochondrion, plastid	20.7	52.74
CDY58293	Canola	cytosol	38.98	52.16
CDX85645	Canola	plastid	97.04	51.87
CDX76233	Canola	mitochondrion, plastid	30.65	51.58
CDY38426	Canola	cytosol	46.77	47.93
CDY16928	Canola	mitochondrion, plastid	46.77	46.28
CDY42596	Canola	peroxisome	19.89	42.29
CDY01046	Canola	plastid	9.95	38.54
CDY20722	Canola	mitochondrion	13.44	32.26
CDY32779	Canola	cytosol, mitochondrion, nucleus	5.38	31.75
CDY47751	Canola	nucleus, plastid	20.97	31.45
CDY32780	Canola	cytosol	9.68	26.09

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:A0A078C3P2	InterPro:Aden_trnslctor	EnsemblPlants:CDX69638	ProteinID:CDX69638
ProteinID:CDX69638.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00135657001	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF645	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI0004EE99EC	SEG:seg

Description

BnaA10g19870D

Coordinates

chrLK031790:-:1119814..1121842

Molecular Weight (calculated)

40621.8 Da

IEP (calculated)

10.280

GRAVY (calculated)

-0.132

Length

372 amino acids

Sequence
(BLAST)

001: MVEQTQNKLM RTGVVSHDIH GYTSSFQRRA TYGNYTNAAF QYPLAATSRI VATTTTTSPV FVQAPSEKGF SSFAIDFLMG GVSAAVSKTA AAPIERVKLL
101: IQNQDEMLKA GRLSEPYKGI GDCFGRTIKD EGFGSLWRGN TANVIRYFPT QALNFAFKDY FKRLFNFKKD RDGYWKWFAG NLGSGGAAGA SSLLFVYSLD
201: YARTRLANDS KAAKKGGERQ FNGLVDVYKK TLKSDGIAGL YRGFNISCVG IIVYRGLYFG LYDSLKPLLP ADLQDSFFAS FALGWLITNG AGLASYPIDT
301: VRRRMMMTSG EAVKYKSSMD AFQQILKKEG PKSLFKGAGA NILRAIAGAG VLSGYDKLQL LLLGKKYGSG SG

Best Arabidopsis Sequence Match ( AT3G08580.1 )
(BLAST)

001: MVDQVQHPTI AQKAAGQFMR SSVSKDVQVG YQRPSMYQRH ATYGNYSNAA FQFPPTSRML ATTASPVFVQ TPGEKGFTNF ALDFLMGGVS AAVSKTAAAP
101: IERVKLLIQN QDEMIKAGRL SEPYKGIGDC FGRTIKDEGF GSLWRGNTAN VIRYFPTQAL NFAFKDYFKR LFNFKKDRDG YWKWFAGNLA SGGAAGASSL
201: LFVYSLDYAR TRLANDAKAA KKGGGGRQFD GLVDVYRKTL KTDGIAGLYR GFNISCVGII VYRGLYFGLY DSVKPVLLTG DLQDSFFASF ALGWVITNGA
301: GLASYPIDTV RRRMMMTSGE AVKYKSSLDA FKQILKNEGA KSLFKGAGAN ILRAVAGAGV LSGYDKLQLI VFGKKYGSGG A

Arabidopsis Description

AAC1AAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178V544]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.