CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019626.1-P	Field mustard	cytosol	98.64	78.42
CDY58293	Canola	cytosol	93.67	74.46
AT5G17400.1	Thale cress	cytosol	83.71	60.46
CDY02706	Canola	cytosol, mitochondrion, plastid	81.45	58.63
CDX85456	Canola	cytosol, mitochondrion, plastid	80.54	57.98
CDY01045	Canola	golgi, mitochondrion, plastid	35.29	53.42
CDY38426	Canola	cytosol	86.43	52.62
CDY16928	Canola	mitochondrion, plastid	86.88	51.06
VIT_17s0000g04970.t01	Wine grape	mitochondrion	70.59	50.32
GSMUA_AchrUn_...	Banana	cytosol	65.61	48.99
KRH41838	Soybean	cytosol	67.87	47.77
KRH60537	Soybean	cytosol	66.97	47.13
GSMUA_Achr6P35660_001	Banana	cytosol	63.35	46.51
Solyc06g069410.2.1	Tomato	cytosol, mitochondrion, plastid	63.8	45.05
PGSC0003DMT400010402	Potato	cytosol, mitochondrion, plastid	62.9	44.41
CDY01046	Canola	plastid	19.0	43.75
CDY42596	Canola	peroxisome	33.03	41.71
Os11t0661300-01	Rice	mitochondrion	61.09	41.03
TraesCS3B01G050500.1	Wheat	mitochondrion	60.63	40.12
TraesCS3B01G033100.1	Wheat	cytosol	60.63	40.0
TraesCS3A01G048500.1	Wheat	cytosol, plastid	60.63	39.88
TraesCS3D01G030800.1	Wheat	mitochondrion	60.18	39.82
EES04810	Sorghum	cytosol, mitochondrion, plastid	58.37	39.21
Zm00001d016230_P001	Maize	cytosol	43.89	38.8
HORVU3Hr1G004820.22	Barley	mitochondrion	61.09	32.93
CDY14242	Canola	plastid	55.66	32.63
CDX97439	Canola	plastid	55.66	32.63
CDX69638	Canola	mitochondrion, plastid	51.58	30.65
CDX70507	Canola	plastid	52.04	30.5
CDX78525	Canola	plastid	52.04	30.5
CDY09801	Canola	plastid	51.58	30.0
CDX91117	Canola	plastid	51.58	29.92
CDY32780	Canola	cytosol	11.76	18.84
CDX85645	Canola	plastid	51.58	16.38
CDY47751	Canola	nucleus, plastid	15.84	14.11
CDY20722	Canola	mitochondrion	7.69	10.97
CDY32779	Canola	cytosol, mitochondrion, nucleus	0.0	0.0

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:A0A078CME0	InterPro:Aden_trnslctor	EnsemblPlants:CDX76233	ProteinID:CDX76233
ProteinID:CDX76233.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00126559001	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF472	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI0004EF2A06	SEG:seg

Description

BnaA04g04970D

Coordinates

chrLK031806:+:2014198..2015251

Molecular Weight (calculated)

24964.5 Da

IEP (calculated)

10.242

GRAVY (calculated)

-0.021

Length

221 amino acids

Sequence
(BLAST)

001: MMGGSAAIVA KSAAAPIKRV KLLLQNQGEM IKTRHLTRSY TGLGSCFVRI FREEGVLSFW RGHLTRPYTG YFKTRIRCFK EKDDYLKWFA GNVASGSADG
101: ATTLLFMYHL DYARTRLGND AKECSVSGRR QFKGMLDVYR KTLSSDGVKG LCFGVSILGI TLYRGMYFRM YDTIKPIVLV GSLEENFLAS FLLGWSITTS
201: AGVIAYPFDT LHRIAYKHWL Q

Best Arabidopsis Sequence Match ( AT4G28390.1 )
(BLAST)

001: MDGSKHPSVF QKLHGQSYLI NRLSPSVQAR GYCVSGAYVN GGLQSLLQPT SHGVGSSLIP HGSFPVLAHA PSEKTGTGFL IDFLMGGVSA AVSKTAAAPI
101: ERVKLLIQNQ DEMIKAGRLS EPYKGISDCF ARTVKDEGML ALWRGNTANV IRYFPTQALN FAFKDYFKRL FNFKKEKDGY WKWFAGNLAS GGAAGASSLL
201: FVYSLDYART RLANDAKAAK KGGQRQFNGM VDVYKKTIAS DGIVGLYRGF NISCVGIVVY RGLYFGLYDS LKPVVLVDGL QDSFLASFLL GWGITIGAGL
301: ASYPIDTVRR RMMMTSGEAV KYKSSLQAFS QIVKNEGAKS LFKGAGANIL RAVAGAGVLA GYDKLQLIVL GKKYGSGGG

Arabidopsis Description

AAC3ADP,ATP carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49447]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.