Factsheet for VIT_17s0000g04970.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 6
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G17400.1	Thale cress	cytosol	77.74	78.76
KRH41838	Soybean	cytosol	79.68	78.66
KRH60537	Soybean	cytosol	79.03	78.03
CDY02706	Canola	cytosol, mitochondrion, plastid	75.48	76.22
GSMUA_AchrUn_...	Banana	cytosol	72.58	76.01
GSMUA_Achr6P35660_001	Banana	cytosol	72.9	75.08
Bra023616.1-P	Field mustard	cytosol, mitochondrion, plastid	74.19	74.92
CDX85456	Canola	cytosol, mitochondrion, plastid	74.19	74.92
Solyc06g069410.2.1	Tomato	cytosol, mitochondrion, plastid	75.48	74.76
PGSC0003DMT400010402	Potato	cytosol, mitochondrion, plastid	74.84	74.12
CDY58293	Canola	cytosol	65.81	73.38
Bra019626.1-P	Field mustard	cytosol	64.52	71.94
CDY01045	Canola	golgi, mitochondrion, plastid	33.55	71.23
CDX76233	Canola	mitochondrion, plastid	50.32	70.59
Os11t0661300-01	Rice	mitochondrion	73.55	69.3
TraesCS3B01G033100.1	Wheat	cytosol	72.9	67.46
TraesCS3B01G050500.1	Wheat	mitochondrion	72.58	67.37
TraesCS3D01G030800.1	Wheat	mitochondrion	72.58	67.37
TraesCS3A01G048500.1	Wheat	cytosol, plastid	72.9	67.26
EES04810	Sorghum	cytosol, mitochondrion, plastid	70.97	66.87
Zm00001d016230_P001	Maize	cytosol	53.55	66.4
Bra013981.1-P	Field mustard	plastid	76.45	66.02
CDY38426	Canola	cytosol	76.45	65.29
CDY16928	Canola	mitochondrion, plastid	76.45	63.03
HORVU3Hr1G004820.22	Barley	mitochondrion	72.9	55.12
VIT_19s0177g00370.t01	Wine grape	cytosol, mitochondrion	23.87	52.11
VIT_12s0028g03380.t01	Wine grape	plastid	58.06	47.0
VIT_06s0004g01910.t01	Wine grape	cytosol, mitochondrion, plastid	58.06	45.8
VIT_13s0064g01050.t01	Wine grape	cytosol	58.06	37.74
VIT_04s0008g01130.t01	Wine grape	cytosol	35.48	34.06
VIT_10s0116g01120.t01	Wine grape	plastid	9.68	20.41
VIT_00s1209g00010.t01	Wine grape	cytosol, plastid	10.0	20.26
VIT_16s0039g00600.t01	Wine grape	cytosol	14.19	17.67
VIT_03s0038g00080.t01	Wine grape	plastid	10.32	17.3

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100263960	wikigene:100263960	MapMan:24.2.13	InterPro:Aden_trnslctor	ProteinID:CBI15341
ProteinID:CBI15341.3	UniProt:D7SIN0	EMBL:FN594950	GO:GO:0003674	GO:GO:0005215	GO:GO:0005471
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0015866	GO:GO:0015867	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0022857	GO:GO:0046902	GO:GO:0055085	InterPro:IPR018108
InterPro:IPR023395	EntrezGene:LOC100263960	wikigene:LOC100263960	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF472
SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI00015CC096	ArrayExpress:VIT_17s0000g04970	EnsemblPlantsGene:VIT_17s0000g04970	EnsemblPlants:VIT_17s0000g04970.t01
RefSeq:XP_002264965	RefSeq:XP_002264965.1	RefSeq:XP_010663489.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr17:+:5419701..5430294

Molecular Weight (calculated)

34475.0 Da

IEP (calculated)

10.244

GRAVY (calculated)

0.039

Length

310 amino acids

Sequence
(BLAST)

001: MGVRRTQQER FSVDFVMGGG AAVLAKSAAA PIERVKLLLQ NQGEMLKRGH LKRPYMGVAD CFSRVFREEG VLAFWRGNQA NVIRYFPTQA FNFAFKGYFK
101: SLFGCSKEKD GYLKWFAGNV ASGSAAGATT SLFLYHLDYA RTRLATDARD GQRQFKGLLD VYSKTLSTDG IAGLYRGFGI SIMGITLYRG MYFGIYDTMK
201: PIVLVGPFEG NFFASFLLGW SITTVSGVCA YPFDTLRRRM MLTSGQPLKY SSTMHAVLEI VRLEGFTALY RGVTANMLLG MAGAGVLAGY DQLHRIAYRR
301: GYGFEPLQKV

Best Arabidopsis Sequence Match ( AT5G17400.1 )
(BLAST)

001: MALIGKSERF SADFVMGGAA AIVAKSAAAP IERVKLLLQN QGEMIKTGHL IRPYTGLGNC FTRIYREEGV LSFWRGNQAN VIRYFPTQAS NFAFKGYFKN
101: LLGCSKEKDG YLKWFAGNVA SGSAAGATTS LFLYHLDYAR TRLGTDAKEC SVNGKRQFKG MIDVYRKTLS SDGIKGLYRG FGVSIVGITL YRGMYFGMYD
201: TIKPIVLVGS LEGNFLASFL LGWSITTSAG VIAYPFDTLR RRMMLTSGQP VKYRNTIHAL REILKSEGFY ALYRGVTANM LLGVAGAGVL AGYDQLHQIA
301: YKHWVQ

Arabidopsis Description

ER-ANT1ADP,ATP carrier protein ER-ANT1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.