CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02706	Canola	cytosol, mitochondrion, plastid	75.27	92.18
AT5G17400.1	Thale cress	cytosol	75.0	92.16
CDY58293	Canola	cytosol	67.29	91.01
Bra013981.1-P	Field mustard	plastid	86.44	90.53
CDX85456	Canola	cytosol, mitochondrion, plastid	73.67	90.23
CDY01045	Canola	golgi, mitochondrion, plastid	34.31	88.36
CDY38426	Canola	cytosol	84.84	87.88
CDX76233	Canola	mitochondrion, plastid	51.06	86.88
VIT_17s0000g04970.t01	Wine grape	mitochondrion	63.03	76.45
GSMUA_AchrUn_...	Banana	cytosol	57.98	73.65
KRH41838	Soybean	cytosol	60.9	72.93
KRH60537	Soybean	cytosol	59.84	71.66
Solyc06g069410.2.1	Tomato	cytosol, mitochondrion, plastid	59.57	71.57
GSMUA_Achr6P35660_001	Banana	cytosol	57.18	71.43
PGSC0003DMT400010402	Potato	cytosol, mitochondrion, plastid	59.31	71.25
Os11t0661300-01	Rice	mitochondrion	55.59	63.53
TraesCS3B01G050500.1	Wheat	mitochondrion	56.38	63.47
TraesCS3A01G048500.1	Wheat	cytosol, plastid	56.65	63.39
TraesCS3B01G033100.1	Wheat	cytosol	56.38	63.28
TraesCS3D01G030800.1	Wheat	mitochondrion	56.12	63.17
EES04810	Sorghum	cytosol, mitochondrion, plastid	53.99	61.7
Zm00001d016230_P001	Maize	cytosol	40.96	61.6
CDY42596	Canola	peroxisome	24.47	52.57
HORVU3Hr1G004820.22	Barley	mitochondrion	56.65	51.95
CDY01046	Canola	plastid	13.03	51.04
CDX97439	Canola	plastid	49.47	49.34
CDY14242	Canola	plastid	49.2	49.07
CDX69638	Canola	mitochondrion, plastid	46.28	46.77
CDX70507	Canola	plastid	46.81	46.68
CDX78525	Canola	plastid	46.81	46.68
CDY09801	Canola	plastid	46.54	46.05
CDX91117	Canola	plastid	46.54	45.93
CDY47751	Canola	nucleus, plastid	18.88	28.63
CDY20722	Canola	mitochondrion	10.64	25.81
CDY32779	Canola	cytosol, mitochondrion, nucleus	4.26	25.4
CDY32780	Canola	cytosol	9.31	25.36
CDX85645	Canola	plastid	46.81	25.29

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:A0A078FWZ2	UniProt:A0A078FWZ2	InterPro:Aden_trnslctor	EnsemblPlants:CDY16928
ProteinID:CDY16928	ProteinID:CDY16928.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00094844001	InterPro:IPR018108
InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926
PRINTS:PR00927	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF472	SUPFAM:SSF103506	TMHMM:TMhelix
UniParc:UPI0004EDF38A	SEG:seg	:	:	:	:

Description

BnaC09g40550DBnaC09g40550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWZ2]

Coordinates

chrLK032068:+:383107..384594

Molecular Weight (calculated)

42153.6 Da

IEP (calculated)

10.869

GRAVY (calculated)

-0.045

Length

376 amino acids

Sequence
(BLAST)

001: MIISSFSILL RALKRITKQK RNHPLLLSCT WRRSFAAEFP SLSLRRRSYR NHLQVSSLQK HFPNWVGAKR MAFVGKPEKF STDFMMGGAA AIVAKSAAAP
101: IERVKLLLQN QGEMIKTGHL TRPYTGLGNC FLRIFREEGV LSFWRGNQAN VIRYFPTQAS NFAFKGYFKT RLGCSKEKDG YLKWFAGNVA SGSAAGATTS
201: LFLYHLDYAR TRLGTDAKEC SVSGKRQFKG MVDVYRKTLS SDGVKGLYRG FGVSILGITL YRGMYFGMYD TFKPIVLVGS LEGNFLASFL LGWSITTSAG
301: VIAYPFDTVR RRMMLTSGQP VKYRNAVHAL REIMKYEGFF ALYRGVTANM LLGVAGAGVL AGYDQLHRIA YKHLVQ

Best Arabidopsis Sequence Match ( AT5G17400.1 )
(BLAST)

001: MALIGKSERF SADFVMGGAA AIVAKSAAAP IERVKLLLQN QGEMIKTGHL IRPYTGLGNC FTRIYREEGV LSFWRGNQAN VIRYFPTQAS NFAFKGYFKN
101: LLGCSKEKDG YLKWFAGNVA SGSAAGATTS LFLYHLDYAR TRLGTDAKEC SVNGKRQFKG MIDVYRKTLS SDGIKGLYRG FGVSIVGITL YRGMYFGMYD
201: TIKPIVLVGS LEGNFLASFL LGWSITTSAG VIAYPFDTLR RRMMLTSGQP VKYRNTIHAL REILKSEGFY ALYRGVTANM LLGVAGAGVL AGYDQLHQIA
301: YKHWVQ

Arabidopsis Description

ER-ANT1ADP,ATP carrier protein ER-ANT1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.