CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
mitochondrion 3
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01046	Canola	plastid	22.29	40.62
CDX76233	Canola	mitochondrion, plastid	41.71	33.03
CDX85456	Canola	cytosol, mitochondrion, plastid	49.71	28.34
CDY58293	Canola	cytosol	44.57	28.06
CDY02706	Canola	cytosol, mitochondrion, plastid	49.14	28.01
CDY38426	Canola	cytosol	52.0	25.07
CDY16928	Canola	mitochondrion, plastid	52.57	24.47
CDY32780	Canola	cytosol	17.14	21.74
CDX69638	Canola	mitochondrion, plastid	42.29	19.89
CDX78525	Canola	plastid	42.29	19.63
CDX70507	Canola	plastid	42.29	19.63
CDY09801	Canola	plastid	42.29	19.47
CDX91117	Canola	plastid	42.29	19.42
CDX97439	Canola	plastid	41.14	19.1
CDY14242	Canola	plastid	41.14	19.1
CDY01045	Canola	golgi, mitochondrion, plastid	9.71	11.64
CDX85645	Canola	plastid	42.29	10.63
CDY47751	Canola	nucleus, plastid	12.57	8.87
CDY20722	Canola	mitochondrion	5.71	6.45
CDY32779	Canola	cytosol, mitochondrion, nucleus	1.71	4.76

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:A0A078HY26	UniProt:A0A078HY26	EnsemblPlants:CDY42596	ProteinID:CDY42596
ProteinID:CDY42596.1	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00075100001	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF472
SUPFAM:SSF103506	UniParc:UPI0004EBD7AA	SEG:seg	:	:	:

Description

BnaC01g00080DBnaC01g00080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HY26]

Coordinates

chrLK032530:+:24175..25342

Molecular Weight (calculated)

19443.0 Da

IEP (calculated)

11.220

GRAVY (calculated)

0.029

Length

175 amino acids

Sequence
(BLAST)

001: MMGGVAAIVA KSAAAPIERV KLLLQNQGEL IKTRHLTRPY TGLGNCFVRI FREEGVLSFW RGNQANVIRY FPTQTRLSSG HSGYSQLLPV VPAPVVVRRP
101: KPIRKPRVTS PVRASGSVAI VQKMTDTFVI SMALWKLQWF IGSDELRFLE ASMALSHVKN DGVLIQCSMK QDGHL

Best Arabidopsis Sequence Match ( AT5G17400.1 )
(BLAST)

001: MALIGKSERF SADFVMGGAA AIVAKSAAAP IERVKLLLQN QGEMIKTGHL IRPYTGLGNC FTRIYREEGV LSFWRGNQAN VIRYFPTQAS NFAFKGYFKN
101: LLGCSKEKDG YLKWFAGNVA SGSAAGATTS LFLYHLDYAR TRLGTDAKEC SVNGKRQFKG MIDVYRKTLS SDGIKGLYRG FGVSIVGITL YRGMYFGMYD
201: TIKPIVLVGS LEGNFLASFL LGWSITTSAG VIAYPFDTLR RRMMLTSGQP VKYRNTIHAL REILKSEGFY ALYRGVTANM LLGVAGAGVL AGYDQLHQIA
301: YKHWVQ

Arabidopsis Description

ER-ANT1ADP,ATP carrier protein ER-ANT1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.