CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14242	Canola	plastid	96.55	96.55
AT4G28390.1	Thale cress	mitochondrion	90.19	89.71
KRH26962	Soybean	mitochondrion	80.9	83.11
KRH22368	Soybean	mitochondrion	80.9	83.11
KRH25624	Soybean	endoplasmic reticulum	81.17	82.48
KRH55930	Soybean	mitochondrion	80.9	81.99
VIT_12s0028g03380.t01	Wine grape	plastid	81.96	80.68
CDX70507	Canola	plastid	75.6	75.6
Solyc07g053830.2.1	Tomato	plastid	76.66	75.46
CDX78525	Canola	plastid	75.07	75.07
PGSC0003DMT400082806	Potato	cytosol, mitochondrion, plastid	76.39	75.0
CDX69638	Canola	mitochondrion, plastid	73.21	74.19
CDX91117	Canola	plastid	74.8	74.02
CDY09801	Canola	plastid	74.54	73.95
GSMUA_Achr2P13860_001	Banana	cytosol	57.03	66.15
GSMUA_Achr4P27770_001	Banana	nucleus	79.05	63.0
CDY02706	Canola	cytosol, mitochondrion, plastid	48.81	59.93
CDX85456	Canola	cytosol, mitochondrion, plastid	48.01	58.96
CDY01045	Canola	golgi, mitochondrion, plastid	22.02	56.85
CDY58293	Canola	cytosol	41.64	56.47
CDX76233	Canola	mitochondrion, plastid	32.63	55.66
CDY38426	Canola	cytosol	48.81	50.69
CDY16928	Canola	mitochondrion, plastid	49.34	49.47
CDY42596	Canola	peroxisome	19.1	41.14
CDX85645	Canola	plastid	75.07	40.66
CDY01046	Canola	plastid	10.34	40.62
CDY47751	Canola	nucleus, plastid	21.49	32.66
CDY20722	Canola	mitochondrion	13.0	31.61
CDY32780	Canola	cytosol	11.14	30.43
CDY32779	Canola	cytosol, mitochondrion, nucleus	5.04	30.16

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:A0A078E9N0	InterPro:Aden_trnslctor	EnsemblPlants:CDX97439	ProteinID:CDX97439
ProteinID:CDX97439.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00104598001	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF645	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI0004EC4C19	SEG:seg

Description

BnaC08g13040D

Coordinates

chrLK031899:-:665577..667571

Molecular Weight (calculated)

40762.2 Da

IEP (calculated)

10.294

GRAVY (calculated)

-0.022

Length

377 amino acids

Sequence
(BLAST)

001: MNEPRHPSVF QKVHGQTSLI STLSPSVQPR NHSVSGAYVN GGLQSLLQPT SHDTSLIPRG SLPVLAQAPT EKTSTGFLID FLMGGVSAAV SKTAAAPIER
101: VKLLIQNQDE MIRAGRLSEP YKGITDCFTR TVKDEGVLAL WRGNTANVLR YFPTQALNFA FKDYFKRLFN FKKDKDGYWK WFAGNLASGG AAGASSLLFV
201: YSLDYARTRL ANDAKAAKKG GQRQFNGIVD VYKKTIASDG VVGLYRGFNI SCVGIIVYRG LYFGLYDSLK PVVLVDGLED NFLASFLLGW GITIGAGLAS
301: YPIDTVRRRM MMTSGEAVKY TSSLQAFNQI VKKEGAKSLF KGAGANILRA VAGAGVLAGY DKLQLLVFGK KYGSGSG

Best Arabidopsis Sequence Match ( AT4G28390.1 )
(BLAST)

001: MDGSKHPSVF QKLHGQSYLI NRLSPSVQAR GYCVSGAYVN GGLQSLLQPT SHGVGSSLIP HGSFPVLAHA PSEKTGTGFL IDFLMGGVSA AVSKTAAAPI
101: ERVKLLIQNQ DEMIKAGRLS EPYKGISDCF ARTVKDEGML ALWRGNTANV IRYFPTQALN FAFKDYFKRL FNFKKEKDGY WKWFAGNLAS GGAAGASSLL
201: FVYSLDYART RLANDAKAAK KGGQRQFNGM VDVYKKTIAS DGIVGLYRGF NISCVGIVVY RGLYFGLYDS LKPVVLVDGL QDSFLASFLL GWGITIGAGL
301: ASYPIDTVRR RMMMTSGEAV KYKSSLQAFS QIVKNEGAKS LFKGAGANIL RAVAGAGVLA GYDKLQLIVL GKKYGSGGG

Arabidopsis Description

AAC3ADP,ATP carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49447]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.