CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010369.1-P	Field mustard	plastid	100.0	100.0
CDX97439	Canola	plastid	96.55	96.55
AT4G28390.1	Thale cress	mitochondrion	88.06	87.6
KRH22368	Soybean	mitochondrion	80.11	82.29
KRH26962	Soybean	mitochondrion	79.84	82.02
KRH25624	Soybean	endoplasmic reticulum	79.84	81.13
KRH55930	Soybean	mitochondrion	79.58	80.65
VIT_12s0028g03380.t01	Wine grape	plastid	81.7	80.42
CDX70507	Canola	plastid	75.86	75.86
CDX78525	Canola	plastid	75.33	75.33
Solyc07g053830.2.1	Tomato	plastid	75.86	74.67
CDX69638	Canola	mitochondrion, plastid	73.47	74.46
CDX91117	Canola	plastid	75.07	74.28
CDY09801	Canola	plastid	74.8	74.21
PGSC0003DMT400082806	Potato	cytosol, mitochondrion, plastid	75.33	73.96
GSMUA_Achr2P13860_001	Banana	cytosol	57.03	66.15
GSMUA_Achr4P27770_001	Banana	nucleus	78.25	62.37
CDY02706	Canola	cytosol, mitochondrion, plastid	48.81	59.93
CDX85456	Canola	cytosol, mitochondrion, plastid	48.01	58.96
CDY01045	Canola	golgi, mitochondrion, plastid	22.02	56.85
CDY58293	Canola	cytosol	41.64	56.47
CDX76233	Canola	mitochondrion, plastid	32.63	55.66
CDY38426	Canola	cytosol	48.81	50.69
CDY16928	Canola	mitochondrion, plastid	49.07	49.2
CDY42596	Canola	peroxisome	19.1	41.14
CDX85645	Canola	plastid	75.33	40.8
CDY01046	Canola	plastid	9.81	38.54
CDY47751	Canola	nucleus, plastid	21.75	33.06
CDY20722	Canola	mitochondrion	13.0	31.61
CDY32779	Canola	cytosol, mitochondrion, nucleus	5.04	30.16
CDY32780	Canola	cytosol	10.88	29.71

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:A0A078FMV3	UniProt:A0A078FMV3	InterPro:Aden_trnslctor	EnsemblPlants:CDY14242
ProteinID:CDY14242	ProteinID:CDY14242.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00078821001	InterPro:IPR018108
InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926
PRINTS:PR00927	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF645	SUPFAM:SSF103506	TMHMM:TMhelix
UniParc:UPI0002545499	SEG:seg	:	:	:	:

Description

BnaA08g13730DBnaA08g13730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMV3]

Coordinates

chrLK032041:+:432391..434246

Molecular Weight (calculated)

40757.3 Da

IEP (calculated)

10.504

GRAVY (calculated)

-0.018

Length

377 amino acids

Sequence
(BLAST)

001: MNKQRHPSVF QKIRGQTSLI STLSPTVQPR NHSISGAFVN GGLQSLLQST SHGTSLIPRG SLPVLAQAPT EKSSTGFLID FLMGGVSAAV SKTAAAPIER
101: VKLLIQNQDE MLRAGRLSEP YKGITDCFTR TVKDEGVLSL WRGNTANVLR YFPTQALNFA FKDYFKRLFN FKKDKDGYWK WFAGNLASGG AAGASSLLFV
201: YSLDYARTRL ANDAKAAKKG GQRQFNGIVD VYKKTVASDG VVGLYRGFNI SCVGIIVYRG LYFGLYDSLK PVVLVDGLED NFLASFLLGW GITIGAGLAS
301: YPIDTVRRRM MMTSGEAVKY TSSLQAFNQI VKKEGAKSLF KGAGANILRA VAGAGVLAGY DKLQLLVFGK KYGSGSG

Best Arabidopsis Sequence Match ( AT4G28390.1 )
(BLAST)

001: MDGSKHPSVF QKLHGQSYLI NRLSPSVQAR GYCVSGAYVN GGLQSLLQPT SHGVGSSLIP HGSFPVLAHA PSEKTGTGFL IDFLMGGVSA AVSKTAAAPI
101: ERVKLLIQNQ DEMIKAGRLS EPYKGISDCF ARTVKDEGML ALWRGNTANV IRYFPTQALN FAFKDYFKRL FNFKKEKDGY WKWFAGNLAS GGAAGASSLL
201: FVYSLDYART RLANDAKAAK KGGQRQFNGM VDVYKKTIAS DGIVGLYRGF NISCVGIVVY RGLYFGLYDS LKPVVLVDGL QDSFLASFLL GWGITIGAGL
301: ASYPIDTVRR RMMMTSGEAV KYKSSLQAFS QIVKNEGAKS LFKGAGANIL RAVAGAGVLA GYDKLQLIVL GKKYGSGGG

Arabidopsis Description

AAC3ADP,ATP carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49447]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.