Factsheet for Solyc07g053830.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117
nucleus: 25464976

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400082806	Potato	cytosol, mitochondrion, plastid	97.13	96.88
KRH22368	Soybean	mitochondrion	79.11	82.56
KRH26962	Soybean	mitochondrion	78.59	82.02
KRH55930	Soybean	mitochondrion	79.63	81.99
KRH25624	Soybean	endoplasmic reticulum	79.37	81.94
VIT_12s0028g03380.t01	Wine grape	plastid	79.63	79.63
AT4G28390.1	Thale cress	mitochondrion	78.07	78.89
Solyc01g087070.2.1	Tomato	unclear	71.02	78.61
Solyc11g062190.1.1	Tomato	nucleus	77.81	77.81
Solyc11g062130.1.1	Tomato	plastid	77.81	77.2
CDX97439	Canola	plastid	75.46	76.66
CDY14242	Canola	plastid	74.67	75.86
Bra010369.1-P	Field mustard	plastid	74.67	75.86
Solyc01g014210.1.1	Tomato	plastid	51.44	66.33
GSMUA_Achr2P13860_001	Banana	cytosol	54.31	64.0
GSMUA_Achr4P27770_001	Banana	nucleus	77.55	62.79
Solyc06g069410.2.1	Tomato	cytosol, mitochondrion, plastid	48.83	59.74
Solyc08g063010.2.1	Tomato	endoplasmic reticulum, vacuole	21.93	27.36
Solyc08g063030.2.1	Tomato	cytosol	15.67	24.1

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	InterPro:Aden_trnslctor	GO:GO:0003674	GO:GO:0005215	GO:GO:0005471
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0006810	GO:GO:0008150	GO:GO:0009536	GO:GO:0009941	GO:GO:0009987	GO:GO:0015865
GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0022857
GO:GO:0046902	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	UniProt:K4CFS8	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF645	SUPFAM:SSF103506	EnsemblPlantsGene:Solyc07g053830.2	EnsemblPlants:Solyc07g053830.2.1	TMHMM:TMhelix
UniParc:UPI000276C1F9	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7:+:62248461..62251222

Molecular Weight (calculated)

41574.3 Da

IEP (calculated)

10.061

GRAVY (calculated)

-0.086

Length

383 amino acids

Sequence
(BLAST)

001: MGDGSAPPTA FQKIHGHSHL FSLISPHTHS KYTGSYNMTG GYVNEILRGA CMTNCQAANL EVRQLGNILI QAPSEEKKAN SFVVDFLMGG VSAAVSKTAA
101: APIERVKLLI QNQDEMIKAG RLSEPYKGIS DCFGRTIKDE GVLALWRGNT ANVIRYFPTQ ALNFAFKDYF KRLFNFKKDK DGYWKWFAGN LASGGAAGAS
201: SLLFVYSLDY ARTRLANDNK AAKKGGERQF NGLVDVYRKT LKSDGMGGLY RGFTISCVGI IVYRGLYFGM YDSLKPVLLV GDMQDSFFAS FLLGWGITIG
301: AGLASYPIDT VRRRMMMTSG EAVKYKGSMD AFSQIVKNEG TKSLFKGAGA NILRAVAGAG VLAGYDKLQL IMFGKKYGSG GGG

Best Arabidopsis Sequence Match ( AT4G28390.1 )
(BLAST)

001: MDGSKHPSVF QKLHGQSYLI NRLSPSVQAR GYCVSGAYVN GGLQSLLQPT SHGVGSSLIP HGSFPVLAHA PSEKTGTGFL IDFLMGGVSA AVSKTAAAPI
101: ERVKLLIQNQ DEMIKAGRLS EPYKGISDCF ARTVKDEGML ALWRGNTANV IRYFPTQALN FAFKDYFKRL FNFKKEKDGY WKWFAGNLAS GGAAGASSLL
201: FVYSLDYART RLANDAKAAK KGGQRQFNGM VDVYKKTIAS DGIVGLYRGF NISCVGIVVY RGLYFGLYDS LKPVVLVDGL QDSFLASFLL GWGITIGAGL
301: ASYPIDTVRR RMMMTSGEAV KYKSSLQAFS QIVKNEGAKS LFKGAGANIL RAVAGAGVLA GYDKLQLIVL GKKYGSGGG

Arabidopsis Description

AAC3ADP,ATP carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49447]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.