Factsheet for VIT_12s0028g03380.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26962	Soybean	mitochondrion	83.55	87.19
KRH55930	Soybean	mitochondrion	84.33	86.83
KRH25624	Soybean	endoplasmic reticulum	84.07	86.79
KRH22368	Soybean	mitochondrion	82.51	86.1
AT4G28390.1	Thale cress	mitochondrion	82.77	83.64
CDX97439	Canola	plastid	80.68	81.96
Bra010369.1-P	Field mustard	plastid	80.42	81.7
CDY14242	Canola	plastid	80.42	81.7
Solyc07g053830.2.1	Tomato	plastid	79.63	79.63
PGSC0003DMT400082806	Potato	cytosol, mitochondrion, plastid	79.37	79.17
VIT_19s0177g00370.t01	Wine grape	cytosol, mitochondrion	28.72	77.46
VIT_06s0004g01910.t01	Wine grape	cytosol, mitochondrion, plastid	79.37	77.35
VIT_10s0116g01120.t01	Wine grape	plastid	26.37	68.71
GSMUA_Achr2P13860_001	Banana	cytosol	56.92	67.08
GSMUA_Achr4P27770_001	Banana	nucleus	80.16	64.9
VIT_13s0064g01050.t01	Wine grape	cytosol	78.85	63.31
VIT_17s0000g04970.t01	Wine grape	mitochondrion	47.0	58.06
VIT_00s1209g00010.t01	Wine grape	cytosol, plastid	21.41	53.59
VIT_03s0038g00080.t01	Wine grape	plastid	22.19	45.95
VIT_16s0039g00600.t01	Wine grape	cytosol	29.5	45.38
VIT_04s0008g01130.t01	Wine grape	cytosol	30.81	36.53

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100262663	wikigene:100262663	MapMan:24.2.13	EMBL:AM480653	InterPro:Aden_trnslctor
ProteinID:CAN66307	ProteinID:CAN66307.1	ProteinID:CCB47299	ProteinID:CCB47299.1	UniProt:F6H5F0	EMBL:FN595235
GO:GO:0003674	GO:GO:0005215	GO:GO:0005471	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987
GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0022857
GO:GO:0046902	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	EntrezGene:LOC100262663	wikigene:LOC100262663
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF654	SUPFAM:SSF103506	TIGR:TC51979	TMHMM:TMhelix
UniParc:UPI00015CA165	ArrayExpress:VIT_12s0028g03380	EnsemblPlantsGene:VIT_12s0028g03380	EnsemblPlants:VIT_12s0028g03380.t01	unigene:Vvi.6647	RefSeq:XP_002275525
RefSeq:XP_002275525.2	RefSeq:XP_010656992.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr12:+:4173608..4177025

Molecular Weight (calculated)

41101.7 Da

IEP (calculated)

10.243

GRAVY (calculated)

0.017

Length

383 amino acids

Sequence
(BLAST)

001: MADGSQHSSI FQKINGQSYL FSTLSPNLQS RNTSVHSLSS AYVNGGLQTS LLPAGSGNGL ALVSPLSPIF AHAPAEKGAK GFMIDFLMGG VSAAVSKSAA
101: APIERVKLLI QNQDEMIKAG RLSEPYKGIT DCFARTIKDE GVISLWRGNT ANVIRYFPTQ ALNFAFKDYF KRLFNFKKDR DGYWKWFAGN LASGGAAGAS
201: SLLFVYSLDY ARTRLANDAK AAKKGGERQF NGLIDVYKKT IKSDGIAGLY RGFNISCVGI IVYRGLYFGM YDSLKPVVLV GEMQDSFLAS FLLGWGITIG
301: AGLASYPIDT VRRRMMMTSG EAVKYKSSFD AFSQILKNEG AKSLFKGAGA NILRAVAGAG VLAGYDKLQL LVLGKKYGSG GGG

Best Arabidopsis Sequence Match ( AT4G28390.1 )
(BLAST)

001: MDGSKHPSVF QKLHGQSYLI NRLSPSVQAR GYCVSGAYVN GGLQSLLQPT SHGVGSSLIP HGSFPVLAHA PSEKTGTGFL IDFLMGGVSA AVSKTAAAPI
101: ERVKLLIQNQ DEMIKAGRLS EPYKGISDCF ARTVKDEGML ALWRGNTANV IRYFPTQALN FAFKDYFKRL FNFKKEKDGY WKWFAGNLAS GGAAGASSLL
201: FVYSLDYART RLANDAKAAK KGGQRQFNGM VDVYKKTIAS DGIVGLYRGF NISCVGIVVY RGLYFGLYDS LKPVVLVDGL QDSFLASFLL GWGITIGAGL
301: ASYPIDTVRR RMMMTSGEAV KYKSSLQAFS QIVKNEGAKS LFKGAGANIL RAVAGAGVLA GYDKLQLIVL GKKYGSGGG

Arabidopsis Description

AAC3ADP,ATP carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49447]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.