Factsheet for VIT_10s0116g01120.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P19560_001	Banana	cytosol	12.93	73.08
VIT_00s1209g00010.t01	Wine grape	cytosol, plastid	71.43	68.63
VIT_03s0038g00080.t01	Wine grape	plastid	78.23	62.16
VIT_16s0039g00600.t01	Wine grape	cytosol	84.35	49.8
VIT_12s0028g03380.t01	Wine grape	plastid	68.71	26.37
VIT_06s0004g01910.t01	Wine grape	cytosol, mitochondrion, plastid	42.18	15.78
VIT_13s0064g01050.t01	Wine grape	cytosol	39.46	12.16
TraesCS1A01G434300.1	Wheat	peroxisome	23.81	11.48
VIT_17s0000g04970.t01	Wine grape	mitochondrion	20.41	9.68
VIT_04s0008g01130.t01	Wine grape	cytosol	17.01	7.74
GSMUA_Achr1P19540_001	Banana	extracellular	0.0	0.0
VIT_19s0177g00370.t01	Wine grape	cytosol, mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:104877860	MapMan:35.1	InterPro:Aden_trnslctor	ProteinID:CCB43969	ProteinID:CCB43969.1
UniProt:F6GVI5	EMBL:FN594953	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR018108
InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PRINTS:PR00926	PRINTS:PR00927
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF417	SUPFAM:SSF103506	UniParc:UPI000210AC3F	ArrayExpress:VIT_10s0116g01120
EnsemblPlantsGene:VIT_10s0116g01120	EnsemblPlants:VIT_10s0116g01120.t01	RefSeq:XP_010645371.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr10_random:-:544768..545304

Molecular Weight (calculated)

16287.1 Da

IEP (calculated)

10.202

GRAVY (calculated)

0.117

Length

147 amino acids

Sequence
(BLAST)

001: MANGSQHLLI FQKINGQSYL FSTLSPNLQS RNTSVHSLSN AYVNGGLQTS LLPANNGNGL TCPLYHPCLP SLLKLLRRKV QKVFMIDFLI GRVSIVVSKS
101: VAAPIERVKL LIQNRDEIIK AAMLSELYKG ITDCFARPIK NEDVFSL

Best Arabidopsis Sequence Match ( AT4G28390.1 )
(BLAST)

001: MDGSKHPSVF QKLHGQSYLI NRLSPSVQAR GYCVSGAYVN GGLQSLLQPT SHGVGSSLIP HGSFPVLAHA PSEKTGTGFL IDFLMGGVSA AVSKTAAAPI
101: ERVKLLIQNQ DEMIKAGRLS EPYKGISDCF ARTVKDEGML ALWRGNTANV IRYFPTQALN FAFKDYFKRL FNFKKEKDGY WKWFAGNLAS GGAAGASSLL
201: FVYSLDYART RLANDAKAAK KGGQRQFNGM VDVYKKTIAS DGIVGLYRGF NISCVGIVVY RGLYFGLYDS LKPVVLVDGL QDSFLASFLL GWGITIGAGL
301: ASYPIDTVRR RMMMTSGEAV KYKSSLQAFS QIVKNEGAKS LFKGAGANIL RAVAGAGVLA GYDKLQLIVL GKKYGSGGG

Arabidopsis Description

AAC3ADP,ATP carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49447]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.