Factsheet for VIT_00s1209g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P19560_001	Banana	cytosol	14.38	84.62
VIT_10s0116g01120.t01	Wine grape	plastid	68.63	71.43
VIT_03s0038g00080.t01	Wine grape	plastid	75.16	62.16
VIT_16s0039g00600.t01	Wine grape	cytosol	95.42	58.63
VIT_12s0028g03380.t01	Wine grape	plastid	53.59	21.41
VIT_06s0004g01910.t01	Wine grape	cytosol, mitochondrion, plastid	36.6	14.25
VIT_13s0064g01050.t01	Wine grape	cytosol	35.29	11.32
TraesCS1A01G434300.1	Wheat	peroxisome	21.57	10.82
VIT_17s0000g04970.t01	Wine grape	mitochondrion	20.26	10.0
VIT_04s0008g01130.t01	Wine grape	cytosol	16.34	7.74
GSMUA_Achr1P19540_001	Banana	extracellular	0.0	0.0
VIT_19s0177g00370.t01	Wine grape	cytosol, mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.50.40.10	MapMan:35.1	InterPro:Aden_trnslctor	ProteinID:CBI38485	ProteinID:CBI38485.3	ncoils:Coil
UniProt:D7U6W5	EMBL:FN596557	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006139
GO:GO:0006259	GO:GO:0006281	GO:GO:0006284	GO:GO:0006810	GO:GO:0006839	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mt_carrier_dom_sf	PRINTS:PR00926	PRINTS:PR00927
PANTHER:PTHR24089	PANTHER:PTHR24089:SF645	SUPFAM:SSF103506	UniParc:UPI0001BE4BFD	ArrayExpress:VIT_00s1209g00010	EnsemblPlantsGene:VIT_00s1209g00010
EnsemblPlants:VIT_00s1209g00010.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:37917823..37918540

Molecular Weight (calculated)

16828.4 Da

IEP (calculated)

8.707

GRAVY (calculated)

0.104

Length

153 amino acids

Sequence
(BLAST)

001: MFDLISPTRS ASSLIIYAKE EERAVVSHGD LHELRSSNTS VHSLSSAYVN GGLQTSLLPA SSGNGLAWPL YHPCLPSLLK LLWRKVQKVF MIDFLMGGVS
101: IAVSKSAAAS IERVKLLIQN RDEIIKATML SELYKGITDC FARTNKNEDV FSL

Best Arabidopsis Sequence Match ( AT4G28390.1 )
(BLAST)

001: MDGSKHPSVF QKLHGQSYLI NRLSPSVQAR GYCVSGAYVN GGLQSLLQPT SHGVGSSLIP HGSFPVLAHA PSEKTGTGFL IDFLMGGVSA AVSKTAAAPI
101: ERVKLLIQNQ DEMIKAGRLS EPYKGISDCF ARTVKDEGML ALWRGNTANV IRYFPTQALN FAFKDYFKRL FNFKKEKDGY WKWFAGNLAS GGAAGASSLL
201: FVYSLDYART RLANDAKAAK KGGQRQFNGM VDVYKKTIAS DGIVGLYRGF NISCVGIVVY RGLYFGLYDS LKPVVLVDGL QDSFLASFLL GWGITIGAGL
301: ASYPIDTVRR RMMMTSGEAV KYKSSLQAFS QIVKNEGAKS LFKGAGANIL RAVAGAGVLA GYDKLQLIVL GKKYGSGGG

Arabidopsis Description

AAC3ADP,ATP carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49447]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.