Factsheet for VIT_03s0038g00080.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P19560_001	Banana	cytosol	11.35	80.77
VIT_10s0116g01120.t01	Wine grape	plastid	62.16	78.23
VIT_00s1209g00010.t01	Wine grape	cytosol, plastid	62.16	75.16
VIT_16s0039g00600.t01	Wine grape	cytosol	62.16	46.18
VIT_12s0028g03380.t01	Wine grape	plastid	45.95	22.19
VIT_06s0004g01910.t01	Wine grape	cytosol, mitochondrion, plastid	34.59	16.29
TraesCS1A01G434300.1	Wheat	peroxisome	20.54	12.46
VIT_13s0064g01050.t01	Wine grape	cytosol	31.35	12.16
VIT_17s0000g04970.t01	Wine grape	mitochondrion	17.3	10.32
VIT_04s0008g01130.t01	Wine grape	cytosol	14.05	8.05
GSMUA_Achr1P19540_001	Banana	extracellular	0.0	0.0
VIT_19s0177g00370.t01	Wine grape	cytosol, mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.50.40.10	MapMan:35.1	InterPro:Aden_trnslctor	ProteinID:CCB60900	ProteinID:CCB60900.1	UniProt:F6I1T3
EMBL:FN596515	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PRINTS:PR00927
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF417	SUPFAM:SSF103506	UniParc:UPI000210AAA3	ArrayExpress:VIT_03s0038g00080
EnsemblPlantsGene:VIT_03s0038g00080	EnsemblPlants:VIT_03s0038g00080.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3_random:+:50952..58441

Molecular Weight (calculated)

20473.8 Da

IEP (calculated)

9.591

GRAVY (calculated)

0.006

Length

185 amino acids

Sequence
(BLAST)

001: MANLSPSQTT LAWSGATHSP TYYQLIPHHT TSQPIIKYKV GGSLNQVRSN WIELATVVSH GDLHELRSSN TSVHSLSSAY VNGGFQTSLL PASNGNGLAW
101: PLYHPCLSYL LKLLRRKVQK VFMIDFLMGE VSIVVSKSAA APIERVKLLI QNRDEIIKAA MLSELYKGIT DCFARTIKNE DVFSL

Best Arabidopsis Sequence Match ( AT4G28390.1 )
(BLAST)

001: MDGSKHPSVF QKLHGQSYLI NRLSPSVQAR GYCVSGAYVN GGLQSLLQPT SHGVGSSLIP HGSFPVLAHA PSEKTGTGFL IDFLMGGVSA AVSKTAAAPI
101: ERVKLLIQNQ DEMIKAGRLS EPYKGISDCF ARTVKDEGML ALWRGNTANV IRYFPTQALN FAFKDYFKRL FNFKKEKDGY WKWFAGNLAS GGAAGASSLL
201: FVYSLDYART RLANDAKAAK KGGQRQFNGM VDVYKKTIAS DGIVGLYRGF NISCVGIVVY RGLYFGLYDS LKPVVLVDGL QDSFLASFLL GWGITIGAGL
301: ASYPIDTVRR RMMMTSGEAV KYKSSLQAFS QIVKNEGAKS LFKGAGANIL RAVAGAGVLA GYDKLQLIVL GKKYGSGGG

Arabidopsis Description

AAC3ADP,ATP carrier protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49447]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.